RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CDK17Q00537 523 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 KLHL30Q0D2K2 578 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 KNOP1Q1ED39 458 aaKnown RBP13.69□□□□□ -0.22
HMGN1-220ENST00000492280 SLC9C1Q4G0N8 1177 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 HDXQ7Z353 690 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 MYCT1Q8N699 235 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 TLR10Q9BXR5 811 aa13.69□□□□□ -0.22
HMGN1-220ENST00000492280 ARMCX3Q9UH62 379 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-220ENST00000492280 ENTPD3O75355 529 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 SLITRK3O94933 977 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 NR3C1P04150 777 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 TRIM49P0CI25 452 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 TRIM49CP0CI26 452 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 CYP2J2P51589 502 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
HMGN1-220ENST00000492280 ARHGEF10LQ9HCE6 1279 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 LRRN2O75325 713 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 HMGB2P26583 209 aaKnown RBP13.68□□□□□ -0.22
HMGN1-220ENST00000492280 PTK2Q05397 1052 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 KIAA0753Q2KHM9 967 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 KLHDC7AQ5VTJ3 777 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 RSBN1LQ6PCB5 846 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-220ENST00000492280 CEP63Q96MT8 703 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 SPAG5Q96R06 1193 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 RBM12Q9NTZ6 932 aaKnown RBP13.68□□□□□ -0.22
HMGN1-220ENST00000492280 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-220ENST00000492280 JRKLQ9Y4A0 524 aa13.68□□□□□ -0.22
HMGN1-220ENST00000492280 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 NFIBO00712 420 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 GAS7O60861 476 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 TUBB2AQ13885 445 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 ZNF571Q7Z3V5 609 aaPredicted RBP13.67□□□□□ -0.22
HMGN1-220ENST00000492280 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
HMGN1-220ENST00000492280 TUBB2BQ9BVA1 445 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 TSGA10Q9BZW7 698 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 GLT8D2Q9H1C3 349 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 UNC45AQ9H3U1 944 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 COL20A1Q9P218 1284 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 ADAM21Q9UKJ8 722 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 ZMYM2Q9UBW7 1377 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 TMCO5BA8MYB1 307 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 FAM13AO94988 1023 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 UCHL3P15374 230 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 CYP2C19P33261 490 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 ASIC2Q16515 512 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 NAP1L4Q99733 375 aaKnown RBP13.67□□□□□ -0.22
HMGN1-220ENST00000492280 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
HMGN1-220ENST00000492280 ASTN2O75129 1339 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 PITPNM2Q9BZ72 1349 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 CENPFP49454 3210 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 ANO9A1A5B4 782 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 GCOM1H8Y6P7 765 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 LCA5LO95447 670 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 POLR2MP0CAP2 368 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 INPP5BP32019 993 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 PPARDQ03181 441 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 MOXD1Q6UVY6 613 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 BTNL9Q6UXG8 535 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 SPATA4Q8NEY3 305 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 ELMO3Q96BJ8 720 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 MRIQ9BWK5 157 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 STK32BQ9NY57 414 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 ATP8B1O43520 1251 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 FOSP01100 380 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 SERPING1P05155 500 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 DPEP1P16444 411 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 PON1P27169 355 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 CKAP4Q07065 602 aaKnown RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 EXOC3L4Q17RC7 722 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 DEFB132Q7Z7B7 95 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 OGFOD1Q8N543 542 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 FAM20AQ96MK3 541 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 ZNF341Q9BYN7 854 aa13.66□□□□□ -0.22
HMGN1-220ENST00000492280 RBBP6Q7Z6E9 1792 aaKnown RBP13.66□□□□□ -0.22
HMGN1-220ENST00000492280 SORBS3O60504 671 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 PSMD10O75832 226 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 KIF20AO95235 890 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 EYA4O95677 639 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 AFPP02771 609 aaKnown RBP13.65□□□□□ -0.22
HMGN1-220ENST00000492280 CIITAP33076 1130 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 MMP14P50281 582 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 TRADDQ15628 312 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 SKIDA1Q1XH10 827 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 WDR93Q6P2C0 686 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 ZNF662Q6ZS27 426 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 SLC35C1Q96A29 364 aa13.65□□□□□ -0.22
HMGN1-220ENST00000492280 NOX5Q96PH1 765 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms