RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 USP11P51784 963 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 KRT76Q01546 638 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 TMEM62Q0P6H9 643 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 NPY5RQ15761 445 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 MTHFD1LQ6UB35 978 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 SMAP1Q8IYB5 467 aaPredicted RBP16.99■□□□□ 0.31
TOM1-215ENST00000491987 C22orf23Q9BZE7 217 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 MTUS1Q9ULD2 1270 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 KCNJ14Q9UNX9 436 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
TOM1-215ENST00000491987 STK36Q9NRP7 1315 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 COL4A4P53420 1690 aaPredicted RBP16.98■□□□□ 0.31
TOM1-215ENST00000491987 LINC01553A4QN01 128 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 M0R2N6 131 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 MSH4O15457 936 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 HBP1O60381 514 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 UPP2O95045 317 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 SEC24BO95487 1268 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 TDP2O95551 362 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 RPLP2P05387 115 aaKnown RBP16.98■□□□□ 0.31
TOM1-215ENST00000491987 PSAPP07602 524 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 ATP4AP20648 1035 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 FBXO47Q5MNV8 452 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 TRMT1LQ7Z2T5 733 aaKnown RBP16.98■□□□□ 0.31
TOM1-215ENST00000491987 CKAP2LQ8IYA6 745 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 SAMM50Q9Y512 469 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 PCDHA10Q9Y5I2 948 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 TRPV2Q9Y5S1 764 aa16.98■□□□□ 0.31
TOM1-215ENST00000491987 SMIM35A0A1B0GVV1 85 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 M0QZ92 97 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
TOM1-215ENST00000491987 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
TOM1-215ENST00000491987 GAS7O60861 476 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 CTDNEP1O95476 244 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 KLRC1P26715 233 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 HTRA4P83105 476 aaPredicted RBP16.97■□□□□ 0.31
TOM1-215ENST00000491987 GRB10Q13322 594 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 IER5Q5VY09 327 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 KRT40Q6A162 431 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 GALNT17Q6IS24 598 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 TSHZ1Q6ZSZ6 1077 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
TOM1-215ENST00000491987 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 SLC5A5Q92911 643 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 GJA10Q969M2 543 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 TOP1MTQ969P6 601 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
TOM1-215ENST00000491987 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 INSL6Q9Y581 213 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 MAFBQ9Y5Q3 323 aaPredicted RBP16.97■□□□□ 0.31
TOM1-215ENST00000491987 MTCH2Q9Y6C9 303 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 COL1A2P08123 1366 aa16.97■□□□□ 0.31
TOM1-215ENST00000491987 CHD7Q9P2D1 2997 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 WDR64B1ANS9 1081 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 CHMP2AO43633 222 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 LARGE1O95461 756 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 CD52P31358 61 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 NONOQ15233 471 aaKnown RBP eCLIP16.96■□□□□ 0.31
TOM1-215ENST00000491987 INF2Q27J81 1249 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 Q4G0T1 1027 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 ZNF484Q5JVG2 852 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 LRCH2Q5VUJ6 765 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 GDPD5Q8WTR4 605 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 YME1L1Q96TA2 773 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 RIT2Q99578 217 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 PHF20Q9BVI0 1012 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 TEKT3Q9BXF9 490 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 COL25A1Q9BXS0 654 aaPredicted RBP16.96■□□□□ 0.31
TOM1-215ENST00000491987 UNC45AQ9H3U1 944 aa16.96■□□□□ 0.31
TOM1-215ENST00000491987 AGO3Q9H9G7 860 aaKnown RBP16.96■□□□□ 0.31
TOM1-215ENST00000491987 IGSF9BQ9UPX0 1349 aa16.96■□□□□ 0.3
TOM1-215ENST00000491987 XBP1P17861 261 aa16.95■□□□□ 0.3
TOM1-215ENST00000491987 ERVK-21P61565 698 aa16.95■□□□□ 0.3
TOM1-215ENST00000491987 ME3Q16798 604 aa16.95■□□□□ 0.3
TOM1-215ENST00000491987 SP7Q8TDD2 431 aaPredicted RBP16.95■□□□□ 0.3
TOM1-215ENST00000491987 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
TOM1-215ENST00000491987 CELF4Q9BZC1 486 aaKnown RBP16.95■□□□□ 0.3
TOM1-215ENST00000491987 DISC1Q9NRI5 854 aa16.95■□□□□ 0.3
TOM1-215ENST00000491987 ORC3Q9UBD5 711 aaPredicted RBP16.95■□□□□ 0.3
TOM1-215ENST00000491987 CYP3A7-CYP3A51PA0A087WV96 503 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 CCDC194A0A1B0GVG4 234 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 LPXNO60711 386 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 C22orf31O95567 290 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
TOM1-215ENST00000491987 CYP3A7P24462 503 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 NEK4P51957 841 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 NME8Q8N427 588 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 MBOAT7Q96N66 472 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 C17orf80Q9BSJ5 609 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 THEGQ9P2T0 379 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
TOM1-215ENST00000491987 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
TOM1-215ENST00000491987 ENPP3O14638 875 aa16.93■□□□□ 0.3
TOM1-215ENST00000491987 ZNF862O60290 1169 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms