RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 SH3GLB2Q9NR46 395 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 IGSF9BQ9UPX0 1349 aa9.55□□□□□ -0.88
SMARCB1-207ENST00000491967 POTEB3A0JP26 581 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 IPO5O00410 1097 aaKnown RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 REC8O95072 547 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 GHRP10912 638 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 ATP4AP20648 1035 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 PSMA5P28066 241 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 KCNQ1P51787 676 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 TOB2Q14106 344 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 IER5Q5VY09 327 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 FAM117BQ6P1L5 589 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 POTEBQ6S5H4 581 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 TMEM192Q8IY95 271 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 KIAA0319LQ8IZA0 1049 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 FAM177A1Q8N128 213 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 FBXO22Q8NEZ5 403 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 ATP8B4Q8TF62 1192 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 CCDC12Q8WUD4 166 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 LINC01599Q8WXQ3 324 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 MRPL38Q96DV4 380 aaKnown RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 IL17RAQ96F46 866 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 CCDC136Q96JN2 1154 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 UHRF1Q96T88 793 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 RNF26Q9BY78 433 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 TM6SF1Q9BZW5 370 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 AZI2Q9H6S1 392 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 C6orf50Q9HD87 102 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 TBC1D22BQ9NU19 505 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 PKD2L1Q9P0L9 805 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 MAFBQ9Y5Q3 323 aaPredicted RBP9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 CDY2AQ9Y6F7 541 aa9.54□□□□□ -0.88
SMARCB1-207ENST00000491967 COL1A2P08123 1366 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 M0R2N6 131 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 HBP1O60381 514 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 DGKIO75912 1065 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 RB1P06400 928 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 GNA11P29992 359 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 BMPR1AP36894 532 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 USP11P51784 963 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 LEXMQ3ZCV2 418 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 JAKMIP3Q5VZ66 844 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 ZNF746Q6NUN9 644 aaPredicted RBP9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 RUFY3Q7L099 469 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 PLA2G4DQ86XP0 818 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 CCDC60Q8IWA6 550 aaPredicted RBP9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 REXO1Q8N1G1 1221 aaKnown RBP9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 ZBTB10Q96DT7 871 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 ZNF274Q96GC6 653 aaPredicted RBP9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 YME1L1Q96TA2 773 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 FTHL17Q9BXU8 183 aa9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 CELF4Q9BZC1 486 aaKnown RBP9.53□□□□□ -0.88
SMARCB1-207ENST00000491967 KLRC1P26715 233 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 SETQ01105 290 aaPredicted RBP9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 NPY5RQ15761 445 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 ZNF484Q5JVG2 852 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 MIS18BP1Q6P0N0 1132 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 B3GNT9Q6UX72 402 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 SMAP1Q8IYB5 467 aaPredicted RBP9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 MICALL1Q8N3F8 863 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 LINC01465Q8N7H1 131 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 BICD2Q8TD16 824 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 NEK9Q8TD19 979 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 TRAPPC12Q8WVT3 735 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 PHKBQ93100 1093 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 NECAB3Q96P71 396 aaPredicted RBP9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 RIT2Q99578 217 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 TMX1Q9H3N1 280 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 MTUS1Q9ULD2 1270 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 PADI3Q9ULW8 664 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 TRPC6Q9Y210 931 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 RWDD3Q9Y3V2 267 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 TRPV2Q9Y5S1 764 aa9.52□□□□□ -0.89
SMARCB1-207ENST00000491967 FNDC1Q4ZHG4 1894 aaPredicted RBP9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 CYP3A7-CYP3A51PA0A087WV96 503 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 UPP2O95045 317 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 C22orf31O95567 290 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 CYP3A7P24462 503 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 CD52P31358 61 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 ZNF76P36508 570 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 IGBP1P78318 339 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 FAM189BP81408 668 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 FGD1P98174 961 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 KRT76Q01546 638 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 GPM6BQ13491 265 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 CAMK1Q14012 370 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 PTPROQ16827 1216 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 CTC1Q2NKJ3 1217 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 FAM160B1Q5W0V3 765 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 SWSAP1Q6NVH7 229 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 ZNF710Q8N1W2 664 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 FIBCD1Q8N539 461 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 DAGLBQ8NCG7 672 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 SLC5A5Q92911 643 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 MBOAT7Q96N66 472 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 ZNF577Q9BSK1 485 aa9.51□□□□□ -0.89
SMARCB1-207ENST00000491967 PLVAPQ9BX97 442 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms