RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 ERAP1Q9NZ08 941 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 PLXNA4Q9HCM2 1894 aa12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
TMEM39A-211ENST00000491685 DEXIO95424 95 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 LINC00271P0C7V0 271 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 ADCY7P51828 1080 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 ACTR2P61160 394 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 ME3Q16798 604 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 EPC2Q52LR7 807 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 MCTP2Q6DN12 878 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 PPP1R18Q6NYC8 613 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 RPAINQ86UA6 219 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 GLG1Q92896 1179 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 UIMC1Q96RL1 719 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 YME1L1Q96TA2 773 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 LLPHQ9BRT6 129 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 SLC26A6Q9BXS9 759 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 FAM49AQ9H0Q0 323 aaPredicted RBP12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 AGO3Q9H9G7 860 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 AGO4Q9HCK5 861 aaKnown RBP12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 LMCD1Q9NZU5 365 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 SLC9A2Q9UBY0 812 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 CDY2AQ9Y6F7 541 aa12.53□□□□□ -0.4
TMEM39A-211ENST00000491685 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 DDX39AO00148 427 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 CCNE2O96020 404 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 INSRRP14616 1297 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 GNA11P29992 359 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 SREBF1P36956 1147 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 TMEM62Q0P6H9 643 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 SCRN1Q12765 414 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 PLCB4Q15147 1175 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 FBXO47Q5MNV8 452 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 TAF2Q6P1X5 1199 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 FAM177A1Q8N128 213 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 APBB2Q92870 758 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 KHSRPQ92945 711 aaKnown RBP eCLIP12.52□□□□□ -0.413e-7■■■■□ 24
TMEM39A-211ENST00000491685 TNPO1Q92973 898 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 SMARCAD1Q9H4L7 1026 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 UBE2ZQ9H832 354 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 BARHL2Q9NY43 387 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 NFASCO94856 1347 aa12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 FNDC1Q4ZHG4 1894 aaPredicted RBP12.52□□□□□ -0.41
TMEM39A-211ENST00000491685 FAM86B1E9PN63 330 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 RPLP2P05387 115 aaKnown RBP12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 FAM86B2P0C5J1 330 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 SCG2P13521 617 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 CD52P31358 61 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 MRPS6P82932 125 aaKnown RBP12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 HMGN5P82970 282 aaKnown RBP12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 TRIM29Q14134 588 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 NTRK3Q16288 839 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 CEP55Q53EZ4 464 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 JAKMIP3Q5VZ66 844 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 TMEM192Q8IY95 271 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 GTF3C6Q969F1 213 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 CD320Q9NPF0 282 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 MYO7AQ13402 2215 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 NID2Q14112 1375 aa12.51□□□□□ -0.41
TMEM39A-211ENST00000491685 IGLV3-22A0A075B6J6 115 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 FAM86C2PA6NEL3 165 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 H3BNC9 293 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 MEIS1O00470 390 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 MAFGO15525 162 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 NLRP5P59047 1200 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 GPM6BQ13491 265 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 PKN1Q16512 942 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 RTN4RL1Q86UN2 441 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 ALYREFQ86V81 257 aaKnown RBP12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 CCDC60Q8IWA6 550 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 HSCBQ8IWL3 235 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 PHKBQ93100 1093 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 MRPL38Q96DV4 380 aaKnown RBP12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 SDF4Q9BRK5 362 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 ORC3Q9UBD5 711 aaPredicted RBP12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 ADGRA3Q8IWK6 1321 aa12.5□□□□□ -0.41
TMEM39A-211ENST00000491685 IGKV6D-21A0A0A0MT36 114 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 ENPP3O14638 875 aa12.49□□□□□ -0.41
TMEM39A-211ENST00000491685 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms