RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 AGO3Q9H9G7 860 aaKnown RBP20.9■□□□□ 0.94
SMIM4-205ENST00000491607 PCDHA2Q9Y5H9 948 aa20.9■□□□□ 0.94
SMIM4-205ENST00000491607 KAT6AQ92794 2004 aa20.9■□□□□ 0.94
SMIM4-205ENST00000491607 IGLV3-22A0A075B6J6 115 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 H3BNC9 293 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 CYP3A4P08684 503 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 CCT2P78371 535 aaKnown RBP20.89■□□□□ 0.93
SMIM4-205ENST00000491607 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 MTHFD1LQ6UB35 978 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 ABHD15Q6UXT9 468 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 CCDC60Q8IWA6 550 aaPredicted RBP20.89■□□□□ 0.93
SMIM4-205ENST00000491607 FBXL16Q8N461 479 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 CRYGNQ8WXF5 182 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 MRPL38Q96DV4 380 aaKnown RBP20.89■□□□□ 0.93
SMIM4-205ENST00000491607 SLC26A6Q9BXS9 759 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 ZNF302Q9NR11 478 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 TCEAL9Q9UHQ7 104 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 COL4A6Q14031 1691 aa20.89■□□□□ 0.93
SMIM4-205ENST00000491607 ADGRA3Q8IWK6 1321 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 IGKV6D-21A0A0A0MT36 114 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 SMIM35A0A1B0GVV1 85 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 CTNNB1P35222 781 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 SETQ01105 290 aaPredicted RBP20.88■□□□□ 0.93
SMIM4-205ENST00000491607 SWSAP1Q6NVH7 229 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 PDXDC2PQ6P474 469 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 CCDC148Q8NFR7 591 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 BICD2Q8TD16 824 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 RASGRP4Q8TDF6 673 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 ATP8B4Q8TF62 1192 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 RNF26Q9BY78 433 aaPredicted RBP20.88■□□□□ 0.93
SMIM4-205ENST00000491607 AGXT2Q9BYV1 514 aa20.88■□□□□ 0.93
SMIM4-205ENST00000491607 CELF4Q9BZC1 486 aaKnown RBP20.88■□□□□ 0.93
SMIM4-205ENST00000491607 UBE2ZQ9H832 354 aaPredicted RBP20.88■□□□□ 0.93
SMIM4-205ENST00000491607 NCOA5Q9HCD5 579 aaKnown RBP20.88■□□□□ 0.93
SMIM4-205ENST00000491607 TTC28Q96AY4 2481 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 DHX15O43143 795 aaKnown RBP20.87■□□□□ 0.93
SMIM4-205ENST00000491607 HBP1O60381 514 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 KLRC1P26715 233 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 PDIA3P30101 505 aaKnown RBP20.87■□□□□ 0.93
SMIM4-205ENST00000491607 KRT76Q01546 638 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 PAK2Q13177 524 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 BTG3Q14201 252 aaPredicted RBP20.87■□□□□ 0.93
SMIM4-205ENST00000491607 NTRK3Q16288 839 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 PRR16Q569H4 304 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 CKAP2LQ8IYA6 745 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 FTHL17Q9BXU8 183 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 TBC1D22BQ9NU19 505 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 VPS54Q9P1Q0 977 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 PADI3Q9ULW8 664 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 GINS2Q9Y248 185 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 SQORQ9Y6N5 450 aa20.87■□□□□ 0.93
SMIM4-205ENST00000491607 TCF20Q9UGU0 1960 aaKnown RBP20.86■□□□□ 0.93
SMIM4-205ENST00000491607 IGSF9BQ9UPX0 1349 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 KCNA5P22460 613 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 TIGD5Q53EQ6 642 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 RUFY3Q7L099 469 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 TRMT1LQ7Z2T5 733 aaKnown RBP20.86■□□□□ 0.93
SMIM4-205ENST00000491607 NME8Q8N427 588 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 BANK1Q8NDB2 785 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 LINC01599Q8WXQ3 324 aa20.86■□□□□ 0.93
SMIM4-205ENST00000491607 IFNAR1P17181 557 aa20.85■□□□□ 0.93
SMIM4-205ENST00000491607 ZNF746Q6NUN9 644 aaPredicted RBP20.85■□□□□ 0.93
SMIM4-205ENST00000491607 RWDD3Q9Y3V2 267 aa20.85■□□□□ 0.93
SMIM4-205ENST00000491607 SAMM50Q9Y512 469 aa20.85■□□□□ 0.93
SMIM4-205ENST00000491607 COL1A2P08123 1366 aa20.85■□□□□ 0.93
SMIM4-205ENST00000491607 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 DGKIO75912 1065 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 IBSPP21815 317 aaPredicted RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 BMPR1AP36894 532 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 NLRP5P59047 1200 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 NFX1Q12986 1120 aaKnown RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 TMEM266Q2M3C6 531 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 ZNF484Q5JVG2 852 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 RTN4RL1Q86UN2 441 aaPredicted RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 SMAP1Q8IYB5 467 aaPredicted RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 C11orf84Q9BUA3 381 aaPredicted RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 RC3H2Q9HBD1 1191 aaKnown RBP20.84■□□□□ 0.93
SMIM4-205ENST00000491607 ZSWIM6Q9HCJ5 1215 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 CYP46A1Q9Y6A2 500 aa20.84■□□□□ 0.93
SMIM4-205ENST00000491607 KDM3AQ9Y4C1 1321 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 CSPG5O95196 566 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 RB1P06400 928 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 PSAPP07602 524 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 ATP4AP20648 1035 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 EVCP57679 992 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 TOB2Q14106 344 aaPredicted RBP20.83■□□□□ 0.93
SMIM4-205ENST00000491607 TCEAL5Q5H9L2 206 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 EP400NLQ6ZTU2 488 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 NPAS4Q8IUM7 802 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 TRIM22Q8IYM9 498 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 BBXQ8WY36 941 aaPredicted RBP20.83■□□□□ 0.93
SMIM4-205ENST00000491607 ZNF689Q96CS4 500 aaPredicted RBP20.83■□□□□ 0.93
SMIM4-205ENST00000491607 NSUN3Q9H649 340 aaKnown RBP20.83■□□□□ 0.93
SMIM4-205ENST00000491607 GABBR1Q9UBS5 961 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 PCDHA10Q9Y5I2 948 aa20.83■□□□□ 0.93
SMIM4-205ENST00000491607 NLRC5Q86WI3 1866 aa20.82■□□□□ 0.92
SMIM4-205ENST00000491607 C5orf67F2Z3F1 127 aa20.82■□□□□ 0.92
SMIM4-205ENST00000491607 CPLX1O14810 134 aa20.82■□□□□ 0.92
SMIM4-205ENST00000491607 EPB41L2O43491 1005 aaKnown RBP20.82■□□□□ 0.92
SMIM4-205ENST00000491607 RPS6KA5O75582 802 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms