RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 FBXO22Q8NEZ5 403 aa18.75■□□□□ 0.59
PDLIM2-217ENST00000491330 BBXQ8WY36 941 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-217ENST00000491330 NAP1L4Q99733 375 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-217ENST00000491330 COL25A1Q9BXS0 654 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-217ENST00000491330 PCDHA4Q9UN74 947 aa18.75■□□□□ 0.59
PDLIM2-217ENST00000491330 TRPV2Q9Y5S1 764 aa18.75■□□□□ 0.59
PDLIM2-217ENST00000491330 TANC1Q9C0D5 1861 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 LINC01553A4QN01 128 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 MARCH6O60337 910 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 GAS7O60861 476 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 CHRNA1P02708 482 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 KLRC1P26715 233 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 JAK3P52333 1124 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 RUFY4Q6ZNE9 571 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 BLIDQ8IZY5 108 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 RIT2Q99578 217 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 TEKT3Q9BXF9 490 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 BRMS1Q9HCU9 246 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 MTUS1Q9ULD2 1270 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 TELO2Q9Y4R8 837 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 MTCH2Q9Y6C9 303 aa18.74■□□□□ 0.59
PDLIM2-217ENST00000491330 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 MAGEB2O15479 319 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 HTRA4P83105 476 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 PAK2Q13177 524 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 GRB10Q13322 594 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 NONOQ15233 471 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 FBXO47Q5MNV8 452 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 MARCH8Q5T0T0 291 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 MTHFD1LQ6UB35 978 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 KRT25Q7Z3Z0 450 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 TMCO2Q7Z6W1 182 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 FIBCD1Q8N539 461 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 ASB2Q96Q27 587 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 PCYT2Q99447 389 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 CELF4Q9BZC1 486 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 LRFN2Q9ULH4 789 aa18.73■□□□□ 0.59
PDLIM2-217ENST00000491330 IGLV3-22A0A075B6J6 115 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 CCDC194A0A1B0GVG4 234 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 RFXAPO00287 272 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 PPFIA3O75145 1194 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 LPIN1Q14693 890 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 TBCKQ8TEA7 893 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 MAP7D2Q96T17 732 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 GINS2Q9Y248 185 aa18.72■□□□□ 0.59
PDLIM2-217ENST00000491330 LCHNA4D1U4 455 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 GPR182O15218 404 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 DKC1O60832 514 aaKnown RBP eCLIP18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 CCNE2O96020 404 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 LRCH2Q5VUJ6 765 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 METTL13Q8N6R0 699 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 RDM1Q8NG50 284 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 RASGRP4Q8TDF6 673 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 CRYGNQ8WXF5 182 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 HLA-CQ95604 372 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 DISC1Q9NRI5 854 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 GABBR1Q9UBS5 961 aa18.71■□□□□ 0.59
PDLIM2-217ENST00000491330 ENPP3O14638 875 aa18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 DHX15O43143 795 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 MGAT3Q09327 533 aa18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 NFX1Q12986 1120 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 TRIM29Q14134 588 aa18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 SCN5AQ14524 2016 aa18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 CCDC60Q8IWA6 550 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 DAGLBQ8NCG7 672 aa18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 SP7Q8TDD2 431 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 MAFBQ9Y5Q3 323 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 KDM3AQ9Y4C1 1321 aa18.7■□□□□ 0.58
PDLIM2-217ENST00000491330 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 DENND3A2RUS2 1198 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 RPS6KA5O75582 802 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 RB1P06400 928 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 CD52P31358 61 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 CDC42EP1Q00587 391 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 TMEM62Q0P6H9 643 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 BTG3Q14201 252 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 TCTN1Q2MV58 587 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 Q4G0T1 1027 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 MOXD1Q6UVY6 613 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 TRMT1LQ7Z2T5 733 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 MIER3Q7Z3K6 550 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 GDPD5Q8WTR4 605 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 TRAPPC12Q8WVT3 735 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 SCLT1Q96NL6 688 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 LARP6Q9BRS8 491 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 SUGCTQ9HAC7 445 aa18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 TRIP12Q14669 1992 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-217ENST00000491330 CHMP2AO43633 222 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 PFKFB2O60825 505 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 BAG4O95429 457 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 GCFC2P16383 781 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 DNM2P50570 870 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 GPM6BQ13491 265 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 TIGD5Q53EQ6 642 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 NPAS4Q8IUM7 802 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 TMEM192Q8IY95 271 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 UIMC1Q96RL1 719 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 C11orf84Q9BUA3 381 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 C1orf112Q9NSG2 853 aa18.68■□□□□ 0.58
PDLIM2-217ENST00000491330 PADI3Q9ULW8 664 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms