RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 BACH1O14867 736 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 GTPBP6O43824 516 aaPredicted RBP20.43■□□□□ 0.86
HMGN1-219ENST00000491183 UPP2O95045 317 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 DEXIO95424 95 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 SETQ01105 290 aaPredicted RBP20.43■□□□□ 0.86
HMGN1-219ENST00000491183 FAM160B1Q5W0V3 765 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 MIS18BP1Q6P0N0 1132 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 MTHFD1LQ6UB35 978 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 ATXN2LQ8WWM7 1075 aaKnown RBP20.43■□□□□ 0.86
HMGN1-219ENST00000491183 AIFM3Q96NN9 605 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 AGO3Q9H9G7 860 aaKnown RBP20.43■□□□□ 0.86
HMGN1-219ENST00000491183 ZNF302Q9NR11 478 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 THEGQ9P2T0 379 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 PCDHA4Q9UN74 947 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 LOXHD1Q8IVV2 1947 aa20.43■□□□□ 0.86
HMGN1-219ENST00000491183 REV3LO60673 3130 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 SMIM35A0A1B0GVV1 85 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 HBP1O60381 514 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 KLRC1P26715 233 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 USP11P51784 963 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 TMEM62Q0P6H9 643 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 NPY5RQ15761 445 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 TJAP1Q5JTD0 557 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 ZNF746Q6NUN9 644 aaPredicted RBP20.42■□□□□ 0.86
HMGN1-219ENST00000491183 PDXDC2PQ6P474 469 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 ATP8B4Q8TF62 1192 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 GDPD5Q8WTR4 605 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 C17orf80Q9BSJ5 609 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 VCANP13611 3396 aa20.42■□□□□ 0.86
HMGN1-219ENST00000491183 MYH9P35579 1960 aaKnown RBP20.41■□□□□ 0.86
HMGN1-219ENST00000491183 ZBTB42B2RXF5 422 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 M0R2N6 131 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 ENPP3O14638 875 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 RPLP2P05387 115 aaKnown RBP20.41■□□□□ 0.86
HMGN1-219ENST00000491183 SCRN1Q12765 414 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 IER5Q5VY09 327 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 TSHZ1Q6ZSZ6 1077 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 ASB2Q96Q27 587 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 TPCN1Q9ULQ1 816 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 MAFBQ9Y5Q3 323 aaPredicted RBP20.41■□□□□ 0.86
HMGN1-219ENST00000491183 TRPV2Q9Y5S1 764 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 WDR81Q562E7 1941 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 EVPLQ92817 2033 aa20.41■□□□□ 0.86
HMGN1-219ENST00000491183 MSH4O15457 936 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 DTNBO60941 627 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 CPLX2Q6PUV4 134 aaKnown RBP20.4■□□□□ 0.86
HMGN1-219ENST00000491183 RTN4RL1Q86UN2 441 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-219ENST00000491183 CUL9Q8IWT3 2517 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 SMAP1Q8IYB5 467 aaPredicted RBP20.4■□□□□ 0.86
HMGN1-219ENST00000491183 BLIDQ8IZY5 108 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 YME1L1Q96TA2 773 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 CELF4Q9BZC1 486 aaKnown RBP20.4■□□□□ 0.86
HMGN1-219ENST00000491183 PCDHA10Q9Y5I2 948 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 SQORQ9Y6N5 450 aa20.4■□□□□ 0.86
HMGN1-219ENST00000491183 COL1A2P08123 1366 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 PSAPP07602 524 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 CD52P31358 61 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 ANAPC15P60006 121 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 KRT76Q01546 638 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 ZNF484Q5JVG2 852 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 KIAA0319LQ8IZA0 1049 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 NME8Q8N427 588 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 DAGLBQ8NCG7 672 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 LINC01599Q8WXQ3 324 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 SYMPKQ92797 1274 aaKnown RBP20.39■□□□□ 0.85
HMGN1-219ENST00000491183 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.85
HMGN1-219ENST00000491183 LMCD1Q9NZU5 365 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 GABBR1Q9UBS5 961 aa20.39■□□□□ 0.85
HMGN1-219ENST00000491183 TTC3P53804 2025 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 KDM3AQ9Y4C1 1321 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 PFKFB2O60825 505 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 MRPS5P82675 430 aaKnown RBP20.38■□□□□ 0.85
HMGN1-219ENST00000491183 CKAP2LQ8IYA6 745 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 BBXQ8WY36 941 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-219ENST00000491183 SLC5A5Q92911 643 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 GJA10Q969M2 543 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 IL17RAQ96F46 866 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 TSPYL2Q9H2G4 693 aaPredicted RBP20.38■□□□□ 0.85
HMGN1-219ENST00000491183 CDHR5Q9HBB8 845 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 PADI3Q9ULW8 664 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 KCNJ14Q9UNX9 436 aa20.38■□□□□ 0.85
HMGN1-219ENST00000491183 IGSF9BQ9UPX0 1349 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 CYP3A7-CYP3A51PA0A087WV96 503 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 M0QZ92 97 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 CTDNEP1O95476 244 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 TDP2O95551 362 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 CYP3A7P24462 503 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 AK2P54819 239 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 TFF2Q03403 129 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 SKIV2LQ15477 1246 aaKnown RBP20.37■□□□□ 0.85
HMGN1-219ENST00000491183 EPC2Q52LR7 807 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 GALNT17Q6IS24 598 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 TRMT1LQ7Z2T5 733 aaKnown RBP20.37■□□□□ 0.85
HMGN1-219ENST00000491183 FAM177A1Q8N128 213 aaPredicted RBP20.37■□□□□ 0.85
HMGN1-219ENST00000491183 FBXO22Q8NEZ5 403 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 RIT2Q99578 217 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 C22orf23Q9BZE7 217 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 SAMM50Q9Y512 469 aa20.37■□□□□ 0.85
HMGN1-219ENST00000491183 COL4A6Q14031 1691 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms