RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 MROH8Q9H579 483 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 HTTP42858 3142 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 GCNT3O95395 438 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 EDNRBP24530 442 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 RARRES1P49788 294 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 XKR9Q5GH70 373 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 TCP11X2Q5H9J9 407 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 RGMBQ6NW40 437 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 DHTKD1Q96HY7 919 aaPredicted RBP15.43■□□□□ 0.06
SMPD4-219ENST00000491128 DOCK5Q9H7D0 1870 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 A0A0G2JMZ2 1700 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 HIP1RO75146 1068 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 FAM13AO94988 1023 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 GGPS1O95749 300 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 PSMC5P62195 406 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 CEP135Q66GS9 1140 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 TRIM50Q86XT4 487 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 DAW1Q8N136 415 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 CPLX3Q8WVH0 158 aa15.43■□□□□ 0.06
SMPD4-219ENST00000491128 CCDC43Q96MW1 224 aaKnown RBP15.43■□□□□ 0.06
SMPD4-219ENST00000491128 RBBP6Q7Z6E9 1792 aaKnown RBP15.43■□□□□ 0.06
SMPD4-219ENST00000491128 MAFGO15525 162 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 HOXD13P35453 343 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 HSDL1Q3SXM5 330 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 GPR142Q7Z601 462 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.42■□□□□ 0.06
SMPD4-219ENST00000491128 STK24Q9Y6E0 443 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 FRMD3A2A2Y4 597 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 UNCXA6NJT0 531 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 TULP1O00294 542 aaPredicted RBP15.42■□□□□ 0.06
SMPD4-219ENST00000491128 KIF3CO14782 793 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 JAK3P52333 1124 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 TAF1CQ15572 869 aaPredicted RBP15.42■□□□□ 0.06
SMPD4-219ENST00000491128 CENPPQ6IPU0 288 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 ZNF746Q6NUN9 644 aaPredicted RBP15.42■□□□□ 0.06
SMPD4-219ENST00000491128 ZSCAN30Q86W11 494 aa15.42■□□□□ 0.06
SMPD4-219ENST00000491128 GUF1Q8N442 669 aaKnown RBP15.42■□□□□ 0.06
SMPD4-219ENST00000491128 PARK7Q99497 189 aaKnown RBP15.42■□□□□ 0.06
SMPD4-219ENST00000491128 N4BP3O15049 544 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 MARK3P27448 753 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CDC25BP30305 580 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 NR1I3Q14994 352 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 ODR4Q5SWX8 454 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 ABHD15Q6UXT9 468 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 KIFC3Q9BVG8 833 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 SEPT9Q9UHD8 586 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-219ENST00000491128 ZKSCAN5Q9Y2L8 839 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 IVNS1ABPQ9Y6Y0 642 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 GOLGA6L6A8MZA4 724 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 FARP2O94887 1054 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-219ENST00000491128 ATP4AP20648 1035 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CCNA1P78396 465 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CT47A1Q5JQC4 288 aaPredicted RBP15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CYP4F22Q6NT55 531 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 ARMCX5Q6P1M9 558 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 DPP9Q86TI2 863 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 VSTM4Q8IW00 320 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CEP170P1Q96L14 293 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 CNOT6LQ96LI5 555 aaKnown RBP15.41■□□□□ 0.06
SMPD4-219ENST00000491128 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 PASKQ96RG2 1323 aa15.41■□□□□ 0.06
SMPD4-219ENST00000491128 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 CLIC2O15247 247 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 PSAPP07602 524 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 SFNP31947 248 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 COPB1P53618 953 aaKnown RBP15.4■□□□□ 0.06
SMPD4-219ENST00000491128 ADKP55263 362 aaKnown RBP15.4■□□□□ 0.06
SMPD4-219ENST00000491128 PRKCEQ02156 737 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 MAPK7Q13164 816 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 PSMD2Q13200 908 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 FAM102BQ5T8I3 360 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 PARVGQ9HBI0 331 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 COL4A3BPQ9Y5P4 624 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 KIAA1217Q5T5P2 1943 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 SYNGAP1Q96PV0 1343 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 B4DLN1 442 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 STAM2O75886 525 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 MSNP26038 577 aaKnown RBP15.4■□□□□ 0.06
SMPD4-219ENST00000491128 MTERF2Q49AM1 385 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 PRAMEF19Q5SWL8 479 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 C4orf19Q8IY42 314 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 ZBTB10Q96DT7 871 aa15.4■□□□□ 0.06
SMPD4-219ENST00000491128 GSTTP1A0A1W2PQM5 241 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 BICDL2A1A5D9 508 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 TISP43B9A030 160 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 CBFA2T2O43439 604 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 SLC26A4O43511 780 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 ICAM3P32942 547 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 KLK7P49862 253 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 GPIHBP1Q8IV16 184 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 LRRC8AQ8IWT6 810 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 FIZ1Q96SL8 496 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 PCYT2Q99447 389 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 KCTD10Q9H3F6 313 aa15.39■□□□□ 0.05
SMPD4-219ENST00000491128 DDX41Q9UJV9 622 aaKnown RBP15.39■□□□□ 0.05
SMPD4-219ENST00000491128 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms