RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TMEM119Q4V9L6 283 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 ARFGAP2Q8N6H7 521 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 VPS18Q9P253 973 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CASZ1Q86V15 1759 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SNHG28P0DPA3 235 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 PDE6CP51160 858 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CDK17Q00537 523 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 TBC1D10BQ4KMP7 808 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-208ENST00000490993 UTP14CQ5TAP6 766 aaKnown RBP8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CROCCP2Q86T23 111 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 DAAM2Q86T65 1068 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 POMGNT1Q8WZA1 660 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 NT5C1BQ96P26 610 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 WRNIP1Q96S55 665 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 DNAJC7Q99615 494 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 MXRA8Q9BRK3 442 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 RNF146Q9NTX7 359 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 LRRC10BA6NIK2 292 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 MAFGO15525 162 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 ICAM1P05362 532 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 TNNI1P19237 187 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CTNNA2P26232 953 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 COPB2P35606 906 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 CENPPQ6IPU0 288 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 NCAPG2Q86XI2 1143 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 UBE2Q2Q8WVN8 375 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 KIAA1586Q9HCI6 787 aa8.01□□□□□ -1.13
NPHP3-208ENST00000490993 GBP2P32456 591 aaPredicted RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 MTMR3Q13615 1198 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 CATSPER3Q86XQ3 398 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 REXO1L1PQ8IX06 675 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 MICALL2Q8IY33 904 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 FAM76AQ8TAV0 307 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 GLG1Q92896 1179 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 REEP2Q9BRK0 252 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RPAP3Q9H6T3 665 aaPredicted RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 MED4Q9NPJ6 270 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 ZHX2Q9Y6X8 837 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 MSH4O15457 936 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 MAP3K9P80192 1104 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 KCTD2Q14681 263 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 SMC1AQ14683 1233 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 STXBP2Q15833 593 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 COBLL1Q53SF7 1204 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 C4orf32Q8N8J7 132 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 BANK1Q8NDB2 785 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 TRIM11Q96F44 468 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 PKNOX2Q96KN3 472 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 PARD6BQ9BYG5 372 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RAB17Q9H0T7 212 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 ACAD9Q9H845 621 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 L2HGDHQ9H9P8 463 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 FAM198AQ9UFP1 575 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 ZBTB12Q9Y330 459 aaPredicted RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 GSTTP1A0A1W2PQM5 241 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 KCNK3O14649 394 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 ENC1O14682 589 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 HNRNPDLO14979 420 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 ZBTB7AO95365 584 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 SPP2Q13103 211 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 TFDP1Q14186 410 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 SLFN12LQ6IEE8 588 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 SNRNP48Q6IEG0 339 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 CCDC125Q86Z20 511 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RDM1Q8NG50 284 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RBM46Q8TBY0 533 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 ANKRD7Q92527 254 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 FAM212AQ96EL1 285 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RUNDC3BQ96NL0 473 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 MKNK1Q9BUB5 465 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 CNOT7Q9UIV1 285 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 DIS3Q9Y2L1 958 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 CYP3A7-CYP3A51PA0A087WV96 503 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 GOLGA6BA6NDN3 693 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 NDC80O14777 642 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 GFPT2O94808 682 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 MOCS3O95396 460 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 CYP3A7P24462 503 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 CCNA1P78396 465 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 CYP27A1Q02318 531 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 APBA1Q02410 837 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 GLE1Q53GS7 698 aaKnown RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 TATDN1Q6P1N9 297 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RAD9BQ6WBX8 426 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 XXYLT1Q8NBI6 393 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 RUBCNQ92622 972 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 TMEM39BQ9GZU3 492 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 SLC5A4Q9NY91 659 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 PARP2Q9UGN5 583 aa8□□□□□ -1.13
NPHP3-208ENST00000490993 CICQ96RK0 1608 aaPredicted RBP8□□□□□ -1.13
NPHP3-208ENST00000490993 CYP3A4P08684 503 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 VIL1P09327 827 aaKnown RBP7.99□□□□□ -1.13
NPHP3-208ENST00000490993 CYP11B2P19099 503 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 MXI1P50539 228 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 CLCN6P51797 869 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 CALCOCO2Q13137 446 aa7.99□□□□□ -1.13
NPHP3-208ENST00000490993 SEPT7Q16181 437 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms