RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
BRD9-209ENST00000490814 KIAA0895Q8NCT3 520 aa11.1□□□□□ -0.63
BRD9-209ENST00000490814 TBC1D31Q96DN5 1066 aa11.1□□□□□ -0.63
BRD9-209ENST00000490814 SPAG5Q96R06 1193 aa11.1□□□□□ -0.63
BRD9-209ENST00000490814 MMADHCQ9H3L0 296 aaPredicted RBP11.1□□□□□ -0.63
BRD9-209ENST00000490814 SH2D4AQ9H788 454 aa11.1□□□□□ -0.63
BRD9-209ENST00000490814 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
BRD9-209ENST00000490814 COL1A1P02452 1464 aaPredicted RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 MYH6P13533 1939 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 BAG3O95817 575 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 GLI1P08151 1106 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 GRM4Q14833 912 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 MIIPQ5JXC2 388 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 KRT79Q5XKE5 535 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 CLEC4GQ6UXB4 293 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 BZW1Q7L1Q6 419 aaKnown RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 EYA3Q99504 573 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 PAPOLBQ9NRJ5 636 aaKnown RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 HAUS2Q9NVX0 235 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 MYMKA6NI61 221 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 TDP2O95551 362 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 MDH1P40925 334 aaKnown RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 PICALMQ13492 652 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 ACBD5Q5T8D3 534 aaPredicted RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 C12orf60Q5U649 245 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 CCDC84Q86UT8 332 aaPredicted RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 DNAAF5Q86Y56 855 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 LARP4BQ92615 738 aaKnown RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
BRD9-209ENST00000490814 BAIAP2L1Q9UHR4 511 aa11.09□□□□□ -0.63
BRD9-209ENST00000490814 ZNF233A6NK53 670 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 FGFR1OPO95684 399 aaKnown RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 ROR2Q01974 943 aaKnown RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 MAN2A1Q16706 1144 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 CFAP221Q4G0U5 840 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 SPTY2D1Q68D10 685 aaPredicted RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 FAM228AQ86W67 206 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 LRRC47Q8N1G4 583 aaKnown RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 OR2W6PQ8NHA6 318 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 TAF4BQ92750 862 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 LSM14BQ9BX40 385 aaKnown RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 PLAAQ9Y263 795 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 RASA3Q14644 834 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 SLC35G1Q2M3R5 365 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 CPLX4Q7Z7G2 160 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 MTMR8Q96EF0 704 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 GOLPH3Q9H4A6 298 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 PLAGL2Q9UPG8 496 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 F8W031 263 aaPredicted RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 BUB1BO60566 1050 aaPredicted RBP11.08□□□□□ -0.64
BRD9-209ENST00000490814 SMNDC1O75940 238 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■■■■□ 19.6
BRD9-209ENST00000490814 TMOD1P28289 359 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 TRADDQ15628 312 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 KIAA0753Q2KHM9 967 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 SLC9C1Q4G0N8 1177 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 KDM7AQ6ZMT4 941 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 ARL10Q8N8L6 244 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 NSMCE1Q8WV22 266 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 ATP6V1G3Q96LB4 118 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 ADAMTS1Q9UHI8 967 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 SALL4Q9UJQ4 1053 aa11.08□□□□□ -0.64
BRD9-209ENST00000490814 PALMO75781 387 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 UBE2SQ16763 222 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 GNPTABQ3T906 1256 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 ACCSLQ4AC99 568 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 YTHDF3Q7Z739 585 aaKnown RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 DDX12PQ92771 950 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 AK8Q96MA6 479 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 RAB34Q9BZG1 259 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 BMP2KQ9NSY1 1161 aaPredicted RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 BTAF1O14981 1849 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 THSD7AQ9UPZ6 1657 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 EPB41P11171 864 aaKnown RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 FERP16591 822 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 GCLCP48506 637 aaPredicted RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 SCNN1BP51168 640 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 GRIK5Q16478 980 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 FAM133AQ8N9E0 248 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 CYFIP2Q96F07 1278 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 RBM17Q96I25 401 aaKnown RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 LUC7LQ9NQ29 371 aaKnown RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 CORO1CQ9ULV4 474 aaPredicted RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 LAD1O00515 517 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 MYZAPP0CAP1 466 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 GNAT1P11488 350 aa11.07□□□□□ -0.64
BRD9-209ENST00000490814 HMGB2P26583 209 aaKnown RBP11.07□□□□□ -0.64
BRD9-209ENST00000490814 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms