RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 LIMCH1Q9UPQ0 1083 aa11.83□□□□□ -0.52
NINJ1-205ENST00000490564 PCDHA2Q9Y5H9 948 aa11.83□□□□□ -0.52
NINJ1-205ENST00000490564 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
NINJ1-205ENST00000490564 IGSF9BQ9UPX0 1349 aa11.83□□□□□ -0.52
NINJ1-205ENST00000490564 COL4A4P53420 1690 aaPredicted RBP11.82□□□□□ -0.52
NINJ1-205ENST00000490564 CCDC194A0A1B0GVG4 234 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 WDR64B1ANS9 1081 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 GAS7O60861 476 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 PSMD10O75832 226 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 CHRNA1P02708 482 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 MYOGP15173 224 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 KRT2P35908 639 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 DEFB103AP81534 67 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 INF2Q27J81 1249 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 ZNF484Q5JVG2 852 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 LRCH2Q5VUJ6 765 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 PDXDC2PQ6P474 469 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 MTHFD1LQ6UB35 978 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 NEK8Q86SG6 692 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 ETNPPLQ8TBG4 499 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 OXER1Q8TDS5 423 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 DNAJB3Q8WWF6 145 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
NINJ1-205ENST00000490564 SEPT8Q92599 483 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 APBB2Q92870 758 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 TEKT3Q9BXF9 490 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 SLC28A3Q9HAS3 691 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 EVPLQ92817 2033 aa11.82□□□□□ -0.52
NINJ1-205ENST00000490564 REV3LO60673 3130 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 SMIM35A0A1B0GVV1 85 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 ZBTB42B2RXF5 422 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 KIF28PB7ZC32 967 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 JAK2O60674 1132 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 FOSL2P15408 326 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 SFNP31947 248 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 MRPS6P82932 125 aaKnown RBP11.81□□□□□ -0.52
NINJ1-205ENST00000490564 LETM2Q2VYF4 491 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 PPP2R2DQ66LE6 453 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 PPP4R3AQ6IN85 833 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
NINJ1-205ENST00000490564 PIK3AP1Q6ZUJ8 805 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 RDM1Q8NG50 284 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 TNFRSF25Q93038 417 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 ZBTB10Q96DT7 871 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
NINJ1-205ENST00000490564 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
NINJ1-205ENST00000490564 UNC45AQ9H3U1 944 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 GABBR1Q9UBS5 961 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 DDX25Q9UHL0 483 aaKnown RBP11.81□□□□□ -0.52
NINJ1-205ENST00000490564 SAMM50Q9Y512 469 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 CDY2AQ9Y6F7 541 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 COL4A6Q14031 1691 aa11.81□□□□□ -0.52
NINJ1-205ENST00000490564 RALGAPA2Q2PPJ7 1873 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 NLRC5Q86WI3 1866 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 SLC37A4O43826 429 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 GJB5O95377 273 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 MMP1P03956 469 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 AMHP03971 560 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 CA3P07451 260 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 GCFC2P16383 781 aaKnown RBP11.8□□□□□ -0.52
NINJ1-205ENST00000490564 KLRC1P26715 233 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 JAK3P52333 1124 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 EARS2Q5JPH6 523 aaKnown RBP11.8□□□□□ -0.52
NINJ1-205ENST00000490564 IER5Q5VY09 327 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 CCDC83Q8IWF9 413 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 NME8Q8N427 588 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 GJA10Q969M2 543 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 FAM167AQ96KS9 214 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 LLPHQ9BRT6 129 aaKnown RBP11.8□□□□□ -0.52
NINJ1-205ENST00000490564 IFIH1Q9BYX4 1025 aaKnown RBP11.8□□□□□ -0.52
NINJ1-205ENST00000490564 FAM49AQ9H0Q0 323 aaPredicted RBP11.8□□□□□ -0.52
NINJ1-205ENST00000490564 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 KCNMB3Q9NPA1 279 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 CEP131Q9UPN4 1083 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 TRPV2Q9Y5S1 764 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 SQORQ9Y6N5 450 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 ARID2Q68CP9 1835 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 KDM3AQ9Y4C1 1321 aa11.8□□□□□ -0.52
NINJ1-205ENST00000490564 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.79□□□□□ -0.52
NINJ1-205ENST00000490564 FAM205CA6NFA0 338 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 M0QZ92 97 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 TBX3O15119 743 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 CHMP2AO43633 222 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 TLL1O43897 1013 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 C22orf31O95567 290 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 GHRP10912 638 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 NR5A1Q13285 461 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 TRIM29Q14134 588 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 LPIN1Q14693 890 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 FBXO47Q5MNV8 452 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 KRT40Q6A162 431 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 TSHZ1Q6ZSZ6 1077 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 MIER3Q7Z3K6 550 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
NINJ1-205ENST00000490564 CKAP2LQ8IYA6 745 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
NINJ1-205ENST00000490564 FAM20AQ96MK3 541 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms