RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 Q6ZUG5 572 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 PLPPR4Q7Z2D5 763 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 TMEM192Q8IY95 271 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 FIBCD1Q8N539 461 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 KIF12Q96FN5 646 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
DUBR-204ENST00000490441 UBE2ZQ9H832 354 aaPredicted RBP12.81□□□□□ -0.36
DUBR-204ENST00000490441 TMEM260Q9NX78 707 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 RWDD3Q9Y3V2 267 aa12.81□□□□□ -0.36
DUBR-204ENST00000490441 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 H3BNC9 293 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 DDX39AO00148 427 aaKnown RBP12.8□□□□□ -0.36
DUBR-204ENST00000490441 MEIS1O00470 390 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 MAP3K13O43283 966 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 SCG2P13521 617 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 KCNA5P22460 613 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 CTNNB1P35222 781 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 SLC26A2P50443 739 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 APOBRQ0VD83 1088 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 ITGB3BPQ13352 177 aaPredicted RBP12.8□□□□□ -0.36
DUBR-204ENST00000490441 MCTP2Q6DN12 878 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 NIPA1Q7RTP0 329 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 BRF1Q92994 677 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 C1QTNF1Q9BXJ1 281 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 FTHL17Q9BXU8 183 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 FAM217BQ9NTX9 383 aaPredicted RBP12.8□□□□□ -0.36
DUBR-204ENST00000490441 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 TRPV2Q9Y5S1 764 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
DUBR-204ENST00000490441 REV3LO60673 3130 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 ESYT2A0FGR8 921 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 ENPP3O14638 875 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 REC8O95072 547 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 CPA1P15085 419 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 PSMA5P28066 241 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 GNA11P29992 359 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 CD52P31358 61 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
DUBR-204ENST00000490441 CLK2P49760 499 aaKnown RBP12.79□□□□□ -0.36
DUBR-204ENST00000490441 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
DUBR-204ENST00000490441 TMEM62Q0P6H9 643 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 PAK2Q13177 524 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 MIS18BP1Q6P0N0 1132 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 REXO1Q8N1G1 1221 aaKnown RBP12.79□□□□□ -0.36
DUBR-204ENST00000490441 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 TRAPPC12Q8WVT3 735 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 ZBTB10Q96DT7 871 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 C11orf84Q9BUA3 381 aaPredicted RBP12.79□□□□□ -0.36
DUBR-204ENST00000490441 SQORQ9Y6N5 450 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 TTC3P53804 2025 aa12.79□□□□□ -0.36
DUBR-204ENST00000490441 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 SMIM35A0A1B0GVV1 85 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 IPO5O00410 1097 aaKnown RBP12.78□□□□□ -0.36
DUBR-204ENST00000490441 HBP1O60381 514 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 ATG7O95352 703 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 RB1P06400 928 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 COL9A1P20849 921 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 HSPA4P34932 840 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 KRT76Q01546 638 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 BTG3Q14201 252 aaPredicted RBP12.78□□□□□ -0.36
DUBR-204ENST00000490441 LEXMQ3ZCV2 418 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 PDXDC2PQ6P474 469 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 MTHFD1LQ6UB35 978 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 EP400NLQ6ZTU2 488 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 CKAP2LQ8IYA6 745 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 NME8Q8N427 588 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 CCDC148Q8NFR7 591 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 BICD2Q8TD16 824 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 KCNB2Q92953 911 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 ZNF577Q9BSK1 485 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 CELF4Q9BZC1 486 aaKnown RBP12.78□□□□□ -0.36
DUBR-204ENST00000490441 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 NSUN3Q9H649 340 aaKnown RBP12.78□□□□□ -0.36
DUBR-204ENST00000490441 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
DUBR-204ENST00000490441 ZNF302Q9NR11 478 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 XIRP2A4UGR9 3374 aa12.78□□□□□ -0.36
DUBR-204ENST00000490441 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.77□□□□□ -0.37
DUBR-204ENST00000490441 FAM86B1E9PN63 330 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
DUBR-204ENST00000490441 CCNE2O96020 404 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 CYP3A4P08684 503 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 FAM86B2P0C5J1 330 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 STAG3L1P0CL83 205 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 RPS6KB1P23443 525 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 BMPR1AP36894 532 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 ABHD15Q6UXT9 468 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 NPAS4Q8IUM7 802 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 LMAN2LQ9H0V9 348 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 TBC1D22BQ9NU19 505 aa12.77□□□□□ -0.37
DUBR-204ENST00000490441 PADI3Q9ULW8 664 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms