RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 Q4G0T1 1027 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 LRCH2Q5VUJ6 765 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 MOXD1Q6UVY6 613 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.73■□□□□ 0.75
SEC13-218ENST00000490283 TMCO2Q7Z6W1 182 aaPredicted RBP19.73■□□□□ 0.75
SEC13-218ENST00000490283 NME8Q8N427 588 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 TRAPPC12Q8WVT3 735 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 BBXQ8WY36 941 aaPredicted RBP19.73■□□□□ 0.75
SEC13-218ENST00000490283 ARNTL2Q8WYA1 636 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 LENG9Q96B70 501 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 FAM167AQ96KS9 214 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 PHF20Q9BVI0 1012 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 CERS4Q9HA82 394 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 BRMS1Q9HCU9 246 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 INSL6Q9Y581 213 aa19.73■□□□□ 0.75
SEC13-218ENST00000490283 SFNP31947 248 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 MGAT3Q09327 533 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 MTHFD1LQ6UB35 978 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 TSHZ1Q6ZSZ6 1077 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 USP38Q8NB14 1042 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 PPM1EQ8WY54 764 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 KAT6AQ92794 2004 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 GTF3C6Q969F1 213 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 DISC1Q9NRI5 854 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 GABBR1Q9UBS5 961 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 CEP131Q9UPN4 1083 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 MAFBQ9Y5Q3 323 aaPredicted RBP19.72■□□□□ 0.75
SEC13-218ENST00000490283 TRPV2Q9Y5S1 764 aa19.72■□□□□ 0.75
SEC13-218ENST00000490283 GBF1Q92538 1859 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 M0R2N6 131 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 CHMP2AO43633 222 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 SEC24BO95487 1268 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 TDP2O95551 362 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 KLRC1P26715 233 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 ME3Q16798 604 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 INF2Q27J81 1249 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 FBXO47Q5MNV8 452 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 NECAB1Q8N987 351 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 SLC5A5Q92911 643 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 ZBTB10Q96DT7 871 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 YME1L1Q96TA2 773 aa19.71■□□□□ 0.75
SEC13-218ENST00000490283 NAP1L4Q99733 375 aaKnown RBP19.71■□□□□ 0.75
SEC13-218ENST00000490283 DDX25Q9UHL0 483 aaKnown RBP19.71■□□□□ 0.75
SEC13-218ENST00000490283 CYP3A7-CYP3A51PA0A087WV96 503 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 CYP3A7P24462 503 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 TRIM29Q14134 588 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 ADGRE1Q14246 886 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 LPIN1Q14693 890 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 NPY5RQ15761 445 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 LETM2Q2VYF4 491 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 TRMT1LQ7Z2T5 733 aaKnown RBP19.7■□□□□ 0.74
SEC13-218ENST00000490283 RDM1Q8NG50 284 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 NRBP2Q9NSY0 501 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 SQORQ9Y6N5 450 aa19.7■□□□□ 0.74
SEC13-218ENST00000490283 LCHNA4D1U4 455 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 UPP2O95045 317 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 CTDNEP1O95476 244 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 GCFC2P16383 781 aaKnown RBP19.69■□□□□ 0.74
SEC13-218ENST00000490283 TMEM62Q0P6H9 643 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 MKRN4PQ13434 485 aaPredicted RBP19.69■□□□□ 0.74
SEC13-218ENST00000490283 MIER3Q7Z3K6 550 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 NEK8Q86SG6 692 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 MICALL1Q8N3F8 863 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 TOP1MTQ969P6 601 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 TGS1Q96RS0 853 aaKnown RBP19.69■□□□□ 0.74
SEC13-218ENST00000490283 CELF4Q9BZC1 486 aaKnown RBP19.69■□□□□ 0.74
SEC13-218ENST00000490283 OSBPL7Q9BZF2 842 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 TSPYL2Q9H2G4 693 aaPredicted RBP19.69■□□□□ 0.74
SEC13-218ENST00000490283 IGSF9BQ9UPX0 1349 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 COL6A3P12111 3177 aa19.69■□□□□ 0.74
SEC13-218ENST00000490283 MAGEB2O15479 319 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 MARCH6O60337 910 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 KRT2P35908 639 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 PAK2Q13177 524 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 CCDC85BQ15834 202 aaPredicted RBP19.68■□□□□ 0.74
SEC13-218ENST00000490283 ODR4Q5SWX8 454 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 PIK3AP1Q6ZUJ8 805 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 METTL13Q8N6R0 699 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 FTHL17Q9BXU8 183 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 UNC45AQ9H3U1 944 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 GINS2Q9Y248 185 aa19.68■□□□□ 0.74
SEC13-218ENST00000490283 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.67■□□□□ 0.74
SEC13-218ENST00000490283 LINC01553A4QN01 128 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 EDIL3O43854 480 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 PSMD10O75832 226 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 ARHGEF15O94989 841 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 LARGE1O95461 756 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 OATP04181 439 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 ATP4AP20648 1035 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 TMOD1P28289 359 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 CD52P31358 61 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 HTRA4P83105 476 aaPredicted RBP19.67■□□□□ 0.74
SEC13-218ENST00000490283 NSUN7Q8NE18 718 aaKnown RBP19.67■□□□□ 0.74
SEC13-218ENST00000490283 MBOAT7Q96N66 472 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 MTUS1Q9ULD2 1270 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 LIMCH1Q9UPQ0 1083 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 KDM3AQ9Y4C1 1321 aa19.67■□□□□ 0.74
SEC13-218ENST00000490283 RFXAPO00287 272 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 DLL1O00548 723 aa19.66■□□□□ 0.74
SEC13-218ENST00000490283 CCNT1O60563 726 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms