RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 STXBP2Q15833 593 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 CDKAL1Q5VV42 579 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 SPATA1Q5VX52 437 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 C17orf99Q6UX52 265 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 SYT10Q6XYQ8 523 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 NLRX1Q86UT6 975 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 VTI1AQ96AJ9 217 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 MTMR9Q96QG7 549 aa11.46□□□□□ -0.57
ABCD4-214ENST00000489678 ESYT2A0FGR8 921 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 MYADML2A6NDP7 307 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 KRT18P05783 430 aaKnown RBP11.46□□□□□ -0.58
ABCD4-214ENST00000489678 LACTBP83111 547 aaPredicted RBP11.46□□□□□ -0.58
ABCD4-214ENST00000489678 NAALADL2Q58DX5 795 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.58
ABCD4-214ENST00000489678 MIER3Q7Z3K6 550 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 CCDC60Q8IWA6 550 aaPredicted RBP11.46□□□□□ -0.58
ABCD4-214ENST00000489678 REXO1L1PQ8IX06 675 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 NELFCDQ8IXH7 590 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 DAGLBQ8NCG7 672 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 KIF18AQ8NI77 898 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 AFG1LQ8WV93 481 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 TRIB2Q92519 343 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.58
ABCD4-214ENST00000489678 LXNQ9BS40 222 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 SLC39A2Q9NP94 309 aa11.46□□□□□ -0.58
ABCD4-214ENST00000489678 NOP56O00567 594 aaKnown RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 SNAI1O95863 264 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 SMARCA1P28370 1054 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CCND2P30279 289 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CCND3P30281 292 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 SP3Q02447 781 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 GRB10Q13322 594 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 FAM110CQ1W6H9 321 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 MTERF2Q49AM1 385 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 FAM133AQ8N9E0 248 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 NKRFO15226 690 aaKnown RBP eCLIP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CA12O43570 354 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 C6orf222P0C671 652 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 BCRP11274 1271 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 LONP1P36776 959 aaKnown RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CCNA1P78396 465 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 SREBF2Q12772 1141 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 DRP2Q13474 957 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 KRT79Q5XKE5 535 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 TRIM65Q6PJ69 517 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 LRRN4CLQ8ND94 238 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 SPATA33Q96N06 139 aa11.45□□□□□ -0.58
ABCD4-214ENST00000489678 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 V9GYY5 206 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-214ENST00000489678 ASIC1P78348 528 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 KCNA1Q09470 495 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 MTFR1Q15390 333 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 OTOP1Q7RTM1 612 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 AGO4Q9HCK5 861 aaKnown RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 DISC1Q9NRI5 854 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 ADD3Q9UEY8 706 aaKnown RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 TRIOO75962 3097 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 TISP43B9A030 160 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 GTPBP6O43824 516 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 PBX1P40424 430 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 LBX1P52954 281 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 AP3B2Q13367 1082 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 CT47A1Q5JQC4 288 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 TOGARAM2Q6ZUX3 1019 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 PDCL2Q8N4E4 241 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 BAG1Q99933 345 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 SEPT9Q9UHD8 586 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 TRIM49BA6NDI0 452 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 NRDCO43847 1150 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 SYCP1Q15431 976 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 METTL13Q8N6R0 699 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
ABCD4-214ENST00000489678 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
ABCD4-214ENST00000489678 KIF2AO00139 706 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-214ENST00000489678 GPR25O00155 361 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 DHX15O43143 795 aaKnown RBP11.43□□□□□ -0.58
ABCD4-214ENST00000489678 SMPD1P17405 629 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 TCF7P36402 384 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-214ENST00000489678 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-214ENST00000489678 ACTR2P61160 394 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 TBC1D8BQ0IIM8 1120 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 FAM47CQ5HY64 1035 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 TMEM130Q8N3G9 435 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 CHST13Q8NET6 341 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 RAET1EQ8TD07 263 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 CRYGNQ8WXF5 182 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 TMEM143Q96AN5 459 aa11.43□□□□□ -0.58
ABCD4-214ENST00000489678 TINF2Q9BSI4 451 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms