RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 SCG2P13521 617 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 NDUFV1P49821 464 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 KRT76Q01546 638 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 TMEM62Q0P6H9 643 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 AP3B2Q13367 1082 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 NECTIN1Q15223 517 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 WWC2Q6AWC2 1192 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 P2RX5Q93086 422 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 CELF4Q9BZC1 486 aaKnown RBP22.16■■□□□ 1.14
APTX-229ENST00000489583 PADI3Q9ULW8 664 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 GINS2Q9Y248 185 aa22.16■■□□□ 1.14
APTX-229ENST00000489583 SMIM35A0A1B0GVV1 85 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 DENND3A2RUS2 1198 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 SMCO2A6NFE2 343 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 MMP1P03956 469 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 NFX1Q12986 1120 aaKnown RBP22.15■■□□□ 1.14
APTX-229ENST00000489583 PLCB4Q15147 1175 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 CLUL1Q15846 466 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 PAN2Q504Q3 1202 aaKnown RBP22.15■■□□□ 1.14
APTX-229ENST00000489583 APOA5Q6Q788 366 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 CKAP2LQ8IYA6 745 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 ZNF689Q96CS4 500 aaPredicted RBP22.15■■□□□ 1.14
APTX-229ENST00000489583 ANO3Q9BYT9 981 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 ALG13Q9NP73 1137 aaKnown RBP22.15■■□□□ 1.14
APTX-229ENST00000489583 AAASQ9NRG9 546 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 PCDHB7Q9Y5E2 793 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 V9GY48 417 aaPredicted RBP22.15■■□□□ 1.14
APTX-229ENST00000489583 BRWD1Q9NSI6 2320 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 NLRC5Q86WI3 1866 aa22.15■■□□□ 1.14
APTX-229ENST00000489583 GOLGA8AA7E2F4 631 aa22.14■■□□□ 1.13
APTX-229ENST00000489583 GOLGA8BA8MQT2 603 aa22.14■■□□□ 1.13
APTX-229ENST00000489583 RBAK-RBAKDNI3L0D1 243 aa22.14■■□□□ 1.13
APTX-229ENST00000489583 HBP1O60381 514 aa22.14■■□□□ 1.13
APTX-229ENST00000489583 KRT32Q14532 448 aa22.14■■□□□ 1.13
APTX-229ENST00000489583 AGO3Q9H9G7 860 aaKnown RBP22.14■■□□□ 1.13
APTX-229ENST00000489583 AGO4Q9HCK5 861 aaKnown RBP22.14■■□□□ 1.13
APTX-229ENST00000489583 PCDHB12Q9Y5F1 795 aa22.14■■□□□ 1.13
APTX-229ENST00000489583 IGSF9BQ9UPX0 1349 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 CCDC196A0A1B0GTZ2 297 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 HMGB1P09429 215 aaKnown RBP22.13■■□□□ 1.13
APTX-229ENST00000489583 ZP2Q05996 745 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 HYAL1Q12794 435 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 COL19A1Q14993 1142 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 MCTP2Q6DN12 878 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 MIS18BP1Q6P0N0 1132 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 MTHFD1LQ6UB35 978 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 DHX32Q7L7V1 743 aaKnown RBP22.13■■□□□ 1.13
APTX-229ENST00000489583 MICAL1Q8TDZ2 1067 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 CCDC12Q8WUD4 166 aaPredicted RBP22.13■■□□□ 1.13
APTX-229ENST00000489583 C11orf16Q9NQ32 467 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 CD207Q9UJ71 328 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 PLAGL2Q9UPG8 496 aa22.13■■□□□ 1.13
APTX-229ENST00000489583 DDX39AO00148 427 aaKnown RBP22.12■■□□□ 1.13
APTX-229ENST00000489583 RPS6KA5O75582 802 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 ARP10275 920 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 KLRC1P26715 233 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 SMAD4Q13485 552 aaKnown RBP22.12■■□□□ 1.13
APTX-229ENST00000489583 PDXDC2PQ6P474 469 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 NIPA1Q7RTP0 329 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 CYP2W1Q8TAV3 490 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 TRAPPC12Q8WVT3 735 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 PGBD1Q96JS3 809 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 PCYT2Q99447 389 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 RC3H2Q9HBD1 1191 aaKnown RBP22.12■■□□□ 1.13
APTX-229ENST00000489583 BARHL2Q9NY43 387 aa22.12■■□□□ 1.13
APTX-229ENST00000489583 MRPL42Q9Y6G3 142 aaKnown RBP22.12■■□□□ 1.13
APTX-229ENST00000489583 CNTNAP5Q8WYK1 1306 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 FSD2A1L4K1 749 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 GPR182O15218 404 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 SREBF1P36956 1147 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 SMAD2Q15796 467 aaKnown RBP22.11■■□□□ 1.13
APTX-229ENST00000489583 CTC1Q2NKJ3 1217 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 PLA2G4DQ86XP0 818 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 ZBTB10Q96DT7 871 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 ZNF302Q9NR11 478 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 C1orf112Q9NSG2 853 aa22.11■■□□□ 1.13
APTX-229ENST00000489583 KDM3AQ9Y4C1 1321 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 KLF18A0A0U1RQI7 1052 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 STXBP3O00186 592 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 MEIS1O00470 390 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 HOXD11P31277 338 aaPredicted RBP22.1■■□□□ 1.13
APTX-229ENST00000489583 SARSP49591 514 aaKnown RBP22.1■■□□□ 1.13
APTX-229ENST00000489583 AKAP17AQ02040 695 aaKnown RBP22.1■■□□□ 1.13
APTX-229ENST00000489583 ZNF484Q5JVG2 852 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 ERICH6BQ5W0A0 696 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 KLHL23Q8NBE8 558 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 ATP8B4Q8TF62 1192 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 COL1A2P08123 1366 aa22.1■■□□□ 1.13
APTX-229ENST00000489583 MBTPS2O43462 519 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 PPFIA3O75145 1194 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 SRGAP2BP0DMP2 458 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 LTBRP36941 435 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 SETQ01105 290 aaPredicted RBP22.09■■□□□ 1.13
APTX-229ENST00000489583 ITGB3BPQ13352 177 aaPredicted RBP22.09■■□□□ 1.13
APTX-229ENST00000489583 TMEM266Q2M3C6 531 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 METTL13Q8N6R0 699 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 POF1BQ8WVV4 589 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 C6orf50Q9HD87 102 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 TBC1D22BQ9NU19 505 aa22.09■■□□□ 1.13
APTX-229ENST00000489583 IPO5O00410 1097 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms