RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 BACH1O14867 736 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 PRCPP42785 496 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 CACNB1Q02641 598 aaPredicted RBP24.07■■□□□ 1.44
SMC4-221ENST00000489573 RAD51AP2Q09MP3 1159 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 STIM1Q13586 685 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 TAPT1Q6NXT6 567 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 C1orf186Q6ZWK4 172 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 ADSSL1Q8N142 457 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 ENOX1Q8TC92 643 aaKnown RBP24.07■■□□□ 1.44
SMC4-221ENST00000489573 USP6NLQ92738 828 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 CCDC43Q96MW1 224 aaKnown RBP24.07■■□□□ 1.44
SMC4-221ENST00000489573 KATNBL1Q9H079 304 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 ANKEF1Q9NU02 776 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 CTNND2Q9UQB3 1225 aa24.07■■□□□ 1.44
SMC4-221ENST00000489573 RBM47A0AV96 593 aaKnown RBP24.06■■□□□ 1.44
SMC4-221ENST00000489573 RGS2P41220 211 aa24.06■■□□□ 1.44
SMC4-221ENST00000489573 PPP1R2P41236 205 aa24.06■■□□□ 1.44
SMC4-221ENST00000489573 RARRES1P49788 294 aa24.06■■□□□ 1.44
SMC4-221ENST00000489573 STK4Q13043 487 aa24.06■■□□□ 1.44
SMC4-221ENST00000489573 COBLL1Q53SF7 1204 aa24.06■■□□□ 1.44
SMC4-221ENST00000489573 SYNRGQ9UMZ2 1314 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 GSTTP1A0A1W2PQM5 241 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 TBCAO75347 108 aaKnown RBP24.05■■□□□ 1.44
SMC4-221ENST00000489573 PAK1Q13153 545 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 DHX37Q8IY37 1157 aaKnown RBP24.05■■□□□ 1.44
SMC4-221ENST00000489573 TRMT44Q8IYL2 757 aaKnown RBP24.05■■□□□ 1.44
SMC4-221ENST00000489573 KIAA0895Q8NCT3 520 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 SEPT1Q8WYJ6 367 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 HPS3Q969F9 1004 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 ABHD16BQ9H3Z7 469 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 ZNF302Q9NR11 478 aa24.05■■□□□ 1.44
SMC4-221ENST00000489573 IGKV6D-21A0A0A0MT36 114 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 ZNF862O60290 1169 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 FCGRTP55899 365 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 FAM26FQ5R3K3 315 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 PADI6Q6TGC4 694 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 APBA2Q99767 749 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 SLC39A2Q9NP94 309 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 MAPK8IP1Q9UQF2 711 aa24.04■■□□□ 1.44
SMC4-221ENST00000489573 PSMA7O14818 248 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 GUCY2CP25092 1073 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 PLCB2Q00722 1185 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 PRKCEQ02156 737 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 HERC4Q5GLZ8 1057 aaPredicted RBP24.03■■□□□ 1.44
SMC4-221ENST00000489573 OTUD6AQ7L8S5 288 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 NELFBQ8WX92 580 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 COPS5Q92905 334 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 MED15Q96RN5 788 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 ZHX3Q9H4I2 956 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 RWDD2AQ9UIY3 292 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 GJD2Q9UKL4 321 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 MAFBQ9Y5Q3 323 aaPredicted RBP24.03■■□□□ 1.44
SMC4-221ENST00000489573 NOP56O00567 594 aaKnown RBP24.03■■□□□ 1.44
SMC4-221ENST00000489573 CYP2B6P20813 491 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 CTGFP29279 349 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 STX17P56962 302 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 ACVR2BQ13705 512 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 UTP14CQ5TAP6 766 aaKnown RBP24.03■■□□□ 1.44
SMC4-221ENST00000489573 FAM160B1Q5W0V3 765 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 DHTKD1Q96HY7 919 aaPredicted RBP24.03■■□□□ 1.44
SMC4-221ENST00000489573 SPATA33Q96N06 139 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 GPR20Q99678 358 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 ODF2LQ9ULJ1 636 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 COL4A3BPQ9Y5P4 624 aa24.03■■□□□ 1.44
SMC4-221ENST00000489573 STBD1O95210 358 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 GAP43P17677 238 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 TCF7P36402 384 aaPredicted RBP24.02■■□□□ 1.44
SMC4-221ENST00000489573 MAP2K2P36507 400 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 LACTBP83111 547 aaPredicted RBP24.02■■□□□ 1.44
SMC4-221ENST00000489573 XKR9Q5GH70 373 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 XKR3Q5GH77 459 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 SPATA1Q5VX52 437 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 OLFML2BQ68BL8 750 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 PLA2G4FQ68DD2 849 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 ANO5Q75V66 913 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 ZHX1Q9UKY1 873 aaPredicted RBP24.02■■□□□ 1.44
SMC4-221ENST00000489573 NFE2L3Q9Y4A8 694 aa24.02■■□□□ 1.44
SMC4-221ENST00000489573 TMEM150BA6NC51 233 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 RSPH10B2B2RC85 870 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 FAM13AO94988 1023 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 GH1P01241 217 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 RSPH10BP0C881 870 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 ADCYAP1R1P41586 468 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 PSMC4P43686 418 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 IRF5Q13568 498 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 LAMC2Q13753 1193 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 TMEM63BQ5T3F8 832 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 SFR1Q86XK3 245 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 AFAP1L1Q8TED9 768 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 PCYT2Q99447 389 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 CFHR5Q9BXR6 569 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 FLRT1Q9NZU1 646 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 PCDHA2Q9Y5H9 948 aa24.01■■□□□ 1.43
SMC4-221ENST00000489573 WDR81Q562E7 1941 aa24■■□□□ 1.43
SMC4-221ENST00000489573 AP5Z1O43299 807 aa24■■□□□ 1.43
SMC4-221ENST00000489573 USO1O60763 962 aaKnown RBP24■■□□□ 1.43
SMC4-221ENST00000489573 VEGFBP49765 207 aa24■■□□□ 1.43
SMC4-221ENST00000489573 ARHGAP1Q07960 439 aa24■■□□□ 1.43
SMC4-221ENST00000489573 HSDL1Q3SXM5 330 aa24■■□□□ 1.43
SMC4-221ENST00000489573 SARM1Q6SZW1 724 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms