RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 STK38Q15208 465 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 ZRSR1Q15695 479 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 GRIK4Q16099 956 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 PLA2G4FQ68DD2 849 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 POTEBQ6S5H4 581 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 USP49Q70CQ1 688 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 CATSPER3Q86XQ3 398 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 IGSF22Q8N9C0 903 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 LINC00301Q8NCQ3 95 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 RDM1Q8NG50 284 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 ATP8B4Q8TF62 1192 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 LMBR1Q8WVP7 490 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 DPF3Q92784 378 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 WNT8BQ93098 351 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 ZNF396Q96N95 335 aaPredicted RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 PLIN2Q99541 437 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 HSD17B14Q9BPX1 270 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 MMTAG2Q9BU76 263 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 LRWD1Q9UFC0 647 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 GTF2IRD1Q9UHL9 959 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 FBXO2Q9UK22 296 aaPredicted RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 ZMYND8Q9ULU4 1186 aaPredicted RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 C17orf102A2RUQ5 167 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 TRIM43BA6NCK2 446 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 DDX11L8A8MPP1 907 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 ZBTB42B2RXF5 422 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 SPTLC2O15270 562 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 BMP15O95972 392 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 CD4P01730 458 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 OATP04181 439 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 SYN1P17600 705 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 ITGB8P26012 769 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 CCT6AP40227 531 aaKnown RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 NPEPPSP55786 919 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 PSMC5P62195 406 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 PTGISQ16647 500 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 TMEM266Q2M3C6 531 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 MARCH8Q5T0T0 291 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 C1orf53Q5VUE5 145 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 NFRKBQ6P4R8 1299 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 RUFY4Q6ZNE9 571 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 ANO5Q75V66 913 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 ANKRD33Q7Z3H0 272 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 SNX29Q8TEQ0 813 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 LRRC15Q8TF66 581 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 DHX38Q92620 1227 aaKnown RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 ATP6V0A1Q93050 837 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 TRIM43Q96BQ3 446 aaPredicted RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 EPSTI1Q96J88 318 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 HTATIP2Q9BUP3 242 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 CSRNP2Q9H175 543 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 PRDM5Q9NQX1 630 aaPredicted RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 BMP2KQ9NSY1 1161 aaPredicted RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 CEP131Q9UPN4 1083 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 SRPRBQ9Y5M8 271 aaKnown RBP9.29□□□□□ -0.92
SF1-218ENST00000489544 ALPK3Q96L96 1907 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 UMODL1Q5DID0 1318 aa9.29□□□□□ -0.92
SF1-218ENST00000489544 DCDC2CA8MYV0 355 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 HBP1O60381 514 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 EVI5O60447 810 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 CLTBP09497 229 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 HOXC8P31273 242 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 ADAM17P78536 824 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 PDIA5Q14554 519 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 MTERF2Q49AM1 385 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 XKR3Q5GH77 459 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 PRPF38BQ5VTL8 546 aaKnown RBP9.28□□□□□ -0.92
SF1-218ENST00000489544 ARL6IP4Q66PJ3 421 aaKnown RBP9.28□□□□□ -0.92
SF1-218ENST00000489544 KCNK18Q7Z418 384 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 SESTD1Q86VW0 696 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 LEO1Q8WVC0 666 aaPredicted RBP9.28□□□□□ -0.92
SF1-218ENST00000489544 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
SF1-218ENST00000489544 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 PPP1R12CQ9BZL4 782 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 ZSWIM4Q9H7M6 989 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 PDLIM7Q9NR12 457 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 CHMP5Q9NZZ3 219 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 RCOR1Q9UKL0 485 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 CIZ1Q9ULV3 898 aaPredicted RBP9.28□□□□□ -0.92
SF1-218ENST00000489544 KIAA1024Q9UPX6 916 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
SF1-218ENST00000489544 E9PMD0 336 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 C22orf31O95567 290 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 YEATS4O95619 227 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 KLRC1P26715 233 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 RPA1P27694 616 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 YWHABP31946 246 aaKnown RBP9.27□□□□□ -0.93
SF1-218ENST00000489544 CYP2C18P33260 490 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 SLC26A2P50443 739 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 KRT85P78386 507 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 PTPN11Q06124 597 aaPredicted RBP9.27□□□□□ -0.93
SF1-218ENST00000489544 GRB10Q13322 594 aa9.27□□□□□ -0.93
SF1-218ENST00000489544 DRP2Q13474 957 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms