RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 LINC01599Q8WXQ3 324 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 SEC62Q99442 399 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 NAPBQ9H115 298 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 CPVLQ9H3G5 476 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 TUT1Q9H6E5 874 aaKnown RBP10.75□□□□□ -0.69
SSBP1-212ENST00000489378 EHMT1Q9H9B1 1298 aa10.75□□□□□ -0.69
SSBP1-212ENST00000489378 C2CD4DB7Z1M9 353 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 PI15O43692 258 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 LGALS2P05162 132 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 ASGR2P07307 311 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 NR3C2P08235 984 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 TOP1P11387 765 aaKnown RBP10.74□□□□□ -0.69
SSBP1-212ENST00000489378 GATMP50440 423 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 SP2Q02086 613 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 ZNF543Q08ER8 600 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 LPIN1Q14693 890 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 ANGPT1Q15389 498 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 ARHGEF16Q5VV41 709 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 ANKRD54Q6NXT1 300 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 CMTR2Q8IYT2 770 aaKnown RBP10.74□□□□□ -0.69
SSBP1-212ENST00000489378 CRIPAKQ8N1N5 446 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 FLCNQ8NFG4 579 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 MICAL1Q8TDZ2 1067 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 BCAS3Q9H6U6 928 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 PXMP2Q9NR77 195 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 DLL3Q9NYJ7 618 aa10.74□□□□□ -0.69
SSBP1-212ENST00000489378 FOXP2O15409 715 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 SMARCA5O60264 1052 aaPredicted RBP10.73□□□□□ -0.69
SSBP1-212ENST00000489378 LMNAP02545 664 aaKnown RBP10.73□□□□□ -0.69
SSBP1-212ENST00000489378 UBA1P22314 1058 aaKnown RBP10.73□□□□□ -0.69
SSBP1-212ENST00000489378 MLLT3P42568 568 aaPredicted RBP10.73□□□□□ -0.69
SSBP1-212ENST00000489378 TECP42680 631 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 ERVFC1P60507 584 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 KCNC3Q14003 757 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 ZNF516Q92618 1163 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 GPKOWQ92917 476 aaPredicted RBP eCLIP10.73□□□□□ -0.695e-7■■■■■ 43.5
SSBP1-212ENST00000489378 IL21Q9HBE4 155 aa10.73□□□□□ -0.69
SSBP1-212ENST00000489378 ZFYP08048 801 aaPredicted RBP10.72□□□□□ -0.69
SSBP1-212ENST00000489378 GOLGA8HP0CJ92 632 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 MYCLP12524 364 aaPredicted RBP10.72□□□□□ -0.69
SSBP1-212ENST00000489378 NPR3P17342 541 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 ADAM17P78536 824 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 MGAT3Q09327 533 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 TSHZ3Q63HK5 1081 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 LLGL2Q6P1M3 1020 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 TMEM184AQ6ZMB5 413 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 RUFY4Q6ZNE9 571 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 RTN4RL1Q86UN2 441 aaPredicted RBP10.72□□□□□ -0.69
SSBP1-212ENST00000489378 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 PANK1Q8TE04 598 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 LMBR1Q8WVP7 490 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 CDCA3Q99618 268 aaPredicted RBP10.72□□□□□ -0.69
SSBP1-212ENST00000489378 UBA5Q9GZZ9 404 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 NR2E1Q9Y466 385 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 R4GN57 208 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 KAT6AQ92794 2004 aa10.72□□□□□ -0.69
SSBP1-212ENST00000489378 ABCB11O95342 1321 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 ORC4O43929 436 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 HMMRO75330 724 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 SNHG28P0DPA3 235 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 AOC1P19801 751 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 CDC37Q16543 378 aaPredicted RBP10.71□□□□□ -0.69
SSBP1-212ENST00000489378 FBXO47Q5MNV8 452 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
SSBP1-212ENST00000489378 DCLK2Q8N568 766 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 DTWD2Q8NBA8 298 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 MAF1Q9H063 256 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 POMKQ9H5K3 350 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 AGO3Q9H9G7 860 aaKnown RBP10.71□□□□□ -0.69
SSBP1-212ENST00000489378 MLXIPQ9HAP2 919 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 ECHDC1Q9NTX5 307 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.69
SSBP1-212ENST00000489378 DOCK5Q9H7D0 1870 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 FSCN2O14926 492 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
SSBP1-212ENST00000489378 GNAT1P11488 350 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 APOBRQ0VD83 1088 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 ST3GAL2Q16842 350 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 RSPO4Q2I0M5 234 aaPredicted RBP10.7□□□□□ -0.7
SSBP1-212ENST00000489378 MCF2L2Q86YR7 1114 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 NPAS4Q8IUM7 802 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 IL31RAQ8NI17 732 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 CYP2W1Q8TAV3 490 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 PDCD2LQ9BRP1 358 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 LIMD1Q9UGP4 676 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 MYH6P13533 1939 aa10.7□□□□□ -0.7
SSBP1-212ENST00000489378 PKD1L2Q7Z442 2459 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 CCDC171Q6TFL3 1326 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 FSD2A1L4K1 749 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 LCE2BO14633 110 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 OPLAHO14841 1288 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 FGF18O76093 207 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 FGRP09769 529 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 SRGAP2BP0DMP2 458 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 CD52P31358 61 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 UBE3AQ05086 875 aa10.69□□□□□ -0.7
SSBP1-212ENST00000489378 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms