RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RASGRP2Q7LDG7 609 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 CCDC84Q86UT8 332 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-207ENST00000489357 FAM160B2Q86V87 743 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 SNX29Q8TEQ0 813 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 CHURC1Q8WUH1 139 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 STAMQ92783 540 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 TRIM47Q96LD4 638 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 ANO3Q9BYT9 981 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 BLOC1S4Q9NUP1 217 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 TMEM260Q9NX78 707 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 RNF186Q9NXI6 227 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-207ENST00000489357 ZBTB21Q9ULJ3 1066 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 GDAQ9Y2T3 454 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 MYH7BA7E2Y1 1941 aa9.4□□□□□ -0.9
VTI1A-207ENST00000489357 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 MEIS2O14770 477 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 SLC37A4O43826 429 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 MARCH6O60337 910 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TRPA1O75762 1119 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TDP2O95551 362 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 GNA14O95837 355 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 GH2P01242 217 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 GYPCP04921 128 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 CETPP11597 493 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 CASP1P29466 404 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 CDC25AP30304 524 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 STX17P56962 302 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 CDK17Q00537 523 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ATP2B2Q01814 1243 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 SNAPC2Q13487 334 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TMEM259Q4ZIN3 620 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 DESI1Q6ICB0 168 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TTBK2Q6IQ55 1244 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 KCTD1Q719H9 257 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 REXO1L1PQ8IX06 675 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 SMYD4Q8IYR2 804 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-207ENST00000489357 MB21D1Q8N884 522 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ZNF280CQ8ND82 737 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TSC1Q92574 1164 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 HAS1Q92839 578 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ERGIC2Q96RQ1 377 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 DNAJC7Q99615 494 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TSG101Q99816 390 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 EDEM3Q9BZQ6 932 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 MAF1Q9H063 256 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 PICK1Q9NRD5 415 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
VTI1A-207ENST00000489357 TRMT1Q9NXH9 659 aaKnown RBP9.39□□□□□ -0.91
VTI1A-207ENST00000489357 MAP3K20Q9NYL2 800 aaKnown RBP9.39□□□□□ -0.91
VTI1A-207ENST00000489357 CGNQ9P2M7 1197 aaKnown RBP9.39□□□□□ -0.91
VTI1A-207ENST00000489357 DNAI1Q9UI46 699 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 CAPN11Q9UMQ6 739 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 SLC45A1Q9Y2W3 748 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 PARP14Q460N5 1801 aa9.39□□□□□ -0.91
VTI1A-207ENST00000489357 ADGRA2Q96PE1 1338 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 CCL15-CCL14A0A0B4J2E2 113 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 C19orf81C9J6K1 198 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 BTBD19C9JJ37 291 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 TEX33O43247 280 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 EDIL3O43854 480 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 GDF11O95390 407 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 S1PR4O95977 384 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 JUNDP17535 347 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 SLC16A2P36021 539 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 BACE1P56817 501 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 UBXN1Q04323 297 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 RBL2Q08999 1139 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 SPP2Q13103 211 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 CCL15Q16663 113 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 FKBP15Q5T1M5 1219 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 TRIM65Q6PJ69 517 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 IRF2BP1Q8IU81 584 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 CLEC10AQ8IUN9 316 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 CCDC65Q8IXS2 484 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 ZNF397Q8NF99 534 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-207ENST00000489357 OR8K1Q8NGG5 319 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 C12orf42Q96LP6 360 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 CEP63Q96MT8 703 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 DUSP9Q99956 384 aaKnown RBP9.38□□□□□ -0.91
VTI1A-207ENST00000489357 TUBGCP2Q9BSJ2 902 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 NUCKS1Q9H1E3 243 aaKnown RBP9.38□□□□□ -0.91
VTI1A-207ENST00000489357 R3HDMLQ9H3Y0 253 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 PRDM9Q9NQV7 894 aa9.38□□□□□ -0.91
VTI1A-207ENST00000489357 LUC7L2Q9Y383 392 aaKnown RBP9.38□□□□□ -0.91
VTI1A-207ENST00000489357 LOXHD1Q8IVV2 1947 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 FRMD3A2A2Y4 597 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 MYMKA6NI61 221 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 KIF5CO60282 957 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 AP1G2O75843 785 aa9.37□□□□□ -0.91
VTI1A-207ENST00000489357 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms