RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 ECM29Q5VYK3 1845 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
SMTN-218ENST00000489337 GCOM1H8Y6P7 765 aaPredicted RBP12.86□□□□□ -0.35
SMTN-218ENST00000489337 MYZAPP0CAP1 466 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 TMOD1P28289 359 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 TNFRSF8P28908 595 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 ZNF76P36508 570 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 SCTRP47872 440 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 PDXDC2PQ6P474 469 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 TBCKQ8TEA7 893 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 ZNF341Q9BYN7 854 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 TBC1D7Q9P0N9 293 aa12.86□□□□□ -0.35
SMTN-218ENST00000489337 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
SMTN-218ENST00000489337 BUB1O43683 1085 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 TDP2O95551 362 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
SMTN-218ENST00000489337 IFFO1Q0D2I5 559 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 SBK1Q52WX2 424 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 DTHD1Q6ZMT9 781 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 DYMQ7RTS9 669 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 CPLX4Q7Z7G2 160 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 ADSSL1Q8N142 457 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 UPF1Q92900 1129 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMTN-218ENST00000489337 KRT12Q99456 494 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
SMTN-218ENST00000489337 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 MAGEA1P43355 309 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 KIF11P52732 1056 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 ZKSCAN8Q15776 578 aaPredicted RBP12.85□□□□□ -0.35
SMTN-218ENST00000489337 QPCTQ16769 361 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 HIBCHQ6NVY1 386 aaPredicted RBP12.85□□□□□ -0.35
SMTN-218ENST00000489337 MAEAQ7L5Y9 396 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 PIK3R5Q8WYR1 880 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 POTEMA6NI47 508 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 KIF3CO14782 793 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 PPP1R7Q15435 360 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 CD302Q8IX05 232 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 NOC4LQ9BVI4 516 aaKnown RBP12.85□□□□□ -0.35
SMTN-218ENST00000489337 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
SMTN-218ENST00000489337 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
SMTN-218ENST00000489337 PEX19P40855 299 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 CCNHP51946 323 aaPredicted RBP12.84□□□□□ -0.35
SMTN-218ENST00000489337 CYP4A11Q02928 519 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 OR2W6PQ8NHA6 318 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 TTYH3Q9C0H2 523 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 DDAH1O94760 285 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 MYO1EQ12965 1108 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 SPP2Q13103 211 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 TRADDQ15628 312 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 GKAP1Q5VSY0 366 aaPredicted RBP12.84□□□□□ -0.35
SMTN-218ENST00000489337 MAGEC3Q8TD91 643 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 WHAMMQ8TF30 809 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 HVCN1Q96D96 273 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 THOC1Q96FV9 657 aaKnown RBP12.84□□□□□ -0.35
SMTN-218ENST00000489337 ZDHHC15Q96MV8 337 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 TLR10Q9BXR5 811 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 GDF3Q9NR23 364 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 RTN2O75298 545 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 NDUFB10O96000 172 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 SF3A3Q12874 501 aaKnown RBP eCLIP12.84□□□□□ -0.352e-6■■■■□ 21.8
SMTN-218ENST00000489337 ACCSLQ4AC99 568 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 FAM114A1Q8IWE2 563 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 REXO1Q8N1G1 1221 aaKnown RBP12.84□□□□□ -0.35
SMTN-218ENST00000489337 SPDL1Q96EA4 605 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 CDK5RAP3Q96JB5 506 aa12.84□□□□□ -0.35
SMTN-218ENST00000489337 FAM207AQ9NSI2 230 aaPredicted RBP12.84□□□□□ -0.35
SMTN-218ENST00000489337 LAMB2P55268 1798 aa12.83□□□□□ -0.35
SMTN-218ENST00000489337 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
SMTN-218ENST00000489337 PFKFB3Q16875 520 aaPredicted RBP12.83□□□□□ -0.36
SMTN-218ENST00000489337 CCDC178Q5BJE1 867 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 NSMFQ6X4W1 530 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 PNMA8AQ86V59 439 aaPredicted RBP12.83□□□□□ -0.36
SMTN-218ENST00000489337 RNF217Q8TC41 542 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 TRPM4Q8TD43 1214 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 CASKIN2Q8WXE0 1202 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 NOX5Q96PH1 765 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 GGA3Q9NZ52 723 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 ARHGAP20Q9P2F6 1191 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 LAMA3Q16787 3333 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 SRRM3A6NNA2 597 aaPredicted RBP12.83□□□□□ -0.36
SMTN-218ENST00000489337 TRAPPC3O43617 180 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 HHIPL2Q6UWX4 724 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 MREGQ8N565 214 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 ARMC2Q8NEN0 867 aa12.83□□□□□ -0.36
SMTN-218ENST00000489337 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms