RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 PLEKHG4Q58EX7 1191 aa27.12■■□□□ 1.93
PTPN18-213ENST00000489215 FAM167AQ96KS9 214 aa27.12■■□□□ 1.93
PTPN18-213ENST00000489215 KIF2CQ99661 725 aa27.12■■□□□ 1.93
PTPN18-213ENST00000489215 DISC1Q9NRI5 854 aa27.12■■□□□ 1.93
PTPN18-213ENST00000489215 M0QZ92 97 aa27.11■■□□□ 1.93
PTPN18-213ENST00000489215 ST18O60284 1047 aa27.11■■□□□ 1.93
PTPN18-213ENST00000489215 PBX2P40425 430 aa27.11■■□□□ 1.93
PTPN18-213ENST00000489215 MBTPS1Q14703 1052 aa27.11■■□□□ 1.93
PTPN18-213ENST00000489215 FAM43BQ6ZT52 329 aaPredicted RBP27.11■■□□□ 1.93
PTPN18-213ENST00000489215 FAM20AQ96MK3 541 aa27.11■■□□□ 1.93
PTPN18-213ENST00000489215 SMIM35A0A1B0GVV1 85 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 PSMD10O75832 226 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 TDP2O95551 362 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 CTSHP09668 335 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 WDR5P61964 334 aaKnown RBP27.1■■□□□ 1.93
PTPN18-213ENST00000489215 HMGN5P82970 282 aaKnown RBP27.1■■□□□ 1.93
PTPN18-213ENST00000489215 PIK3AP1Q6ZUJ8 805 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 HERC6Q8IVU3 1022 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 DBF4BQ8NFT6 615 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 DNAJB3Q8WWF6 145 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 GUCD1Q96NT3 240 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 UIMC1Q96RL1 719 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 CDX2Q99626 313 aaPredicted RBP27.1■■□□□ 1.93
PTPN18-213ENST00000489215 NRBP2Q9NSY0 501 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 GABBR1Q9UBS5 961 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 SQORQ9Y6N5 450 aa27.1■■□□□ 1.93
PTPN18-213ENST00000489215 LAMA2P24043 3122 aaKnown RBP27.1■■□□□ 1.93
PTPN18-213ENST00000489215 TBX3O15119 743 aa27.09■■□□□ 1.93
PTPN18-213ENST00000489215 MMP1P03956 469 aa27.09■■□□□ 1.93
PTPN18-213ENST00000489215 SAFBQ15424 915 aaKnown RBP eCLIP27.09■■□□□ 1.93
PTPN18-213ENST00000489215 MTHFD1LQ6UB35 978 aa27.09■■□□□ 1.93
PTPN18-213ENST00000489215 RUFY4Q6ZNE9 571 aa27.09■■□□□ 1.93
PTPN18-213ENST00000489215 USP38Q8NB14 1042 aa27.09■■□□□ 1.93
PTPN18-213ENST00000489215 GJB4Q9NTQ9 266 aa27.09■■□□□ 1.93
PTPN18-213ENST00000489215 GBF1Q92538 1859 aa27.08■■□□□ 1.93
PTPN18-213ENST00000489215 CCDC83Q8IWF9 413 aa27.08■■□□□ 1.93
PTPN18-213ENST00000489215 MARCH6O60337 910 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 CCNT1O60563 726 aaKnown RBP27.07■■□□□ 1.92
PTPN18-213ENST00000489215 JAK2O60674 1132 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 BAG4O95429 457 aaKnown RBP27.07■■□□□ 1.92
PTPN18-213ENST00000489215 CHRNA1P02708 482 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 AMHP03971 560 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 KLRC1P26715 233 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 RABGGTBP53611 331 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 MRPS6P82932 125 aaKnown RBP27.07■■□□□ 1.92
PTPN18-213ENST00000489215 MIER3Q7Z3K6 550 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 ETNPPLQ8TBG4 499 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 OXER1Q8TDS5 423 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 ZBED2Q9BTP6 218 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 IFIH1Q9BYX4 1025 aaKnown RBP27.07■■□□□ 1.92
PTPN18-213ENST00000489215 NKX2-4Q9H2Z4 354 aa27.07■■□□□ 1.92
PTPN18-213ENST00000489215 MAGEB2O15479 319 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 MGAT3Q09327 533 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 PPP2R2DQ66LE6 453 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 KRT40Q6A162 431 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 ZNF710Q8N1W2 664 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 UNC45AQ9H3U1 944 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 YBX2Q9Y2T7 364 aaKnown RBP27.06■■□□□ 1.92
PTPN18-213ENST00000489215 IGSF9BQ9UPX0 1349 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 WDR81Q562E7 1941 aa27.06■■□□□ 1.92
PTPN18-213ENST00000489215 CHMP2AO43633 222 aa27.05■■□□□ 1.92
PTPN18-213ENST00000489215 TLL1O43897 1013 aa27.05■■□□□ 1.92
PTPN18-213ENST00000489215 DKC1O60832 514 aaKnown RBP eCLIP27.05■■□□□ 1.92
PTPN18-213ENST00000489215 ATP4AP20648 1035 aa27.05■■□□□ 1.92
PTPN18-213ENST00000489215 DIS3L2Q8IYB7 885 aaKnown RBP27.05■■□□□ 1.92
PTPN18-213ENST00000489215 SLFN12Q8IYM2 578 aa27.05■■□□□ 1.92
PTPN18-213ENST00000489215 FAM184AQ8NB25 1140 aa27.05■■□□□ 1.92
PTPN18-213ENST00000489215 FAM49AQ9H0Q0 323 aaPredicted RBP27.05■■□□□ 1.92
PTPN18-213ENST00000489215 CDY2AQ9Y6F7 541 aa27.05■■□□□ 1.92
PTPN18-213ENST00000489215 MCM2P49736 904 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 NR5A1Q13285 461 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 GRIN2CQ14957 1233 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 B3GNT9Q6UX72 402 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 TRAPPC12Q8WVT3 735 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 TNFRSF25Q93038 417 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 C8orf76Q96K31 380 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 GAS2L1Q99501 681 aaPredicted RBP27.04■■□□□ 1.92
PTPN18-213ENST00000489215 KCNMB3Q9NPA1 279 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 KIF3AQ9Y496 699 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 TRPV2Q9Y5S1 764 aa27.04■■□□□ 1.92
PTPN18-213ENST00000489215 BTBD18B2RXH4 712 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 GJB5O95377 273 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 OATP04181 439 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 TMOD1P28289 359 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 ST3GAL1Q11201 340 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 ODR4Q5SWX8 454 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 TSHZ1Q6ZSZ6 1077 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 MICAL3Q7RTP6 2002 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 RAD9AQ99638 391 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 CELF4Q9BZC1 486 aaKnown RBP27.03■■□□□ 1.92
PTPN18-213ENST00000489215 KDM3AQ9Y4C1 1321 aa27.03■■□□□ 1.92
PTPN18-213ENST00000489215 SLC37A4O43826 429 aa27.02■■□□□ 1.92
PTPN18-213ENST00000489215 DTNBO60941 627 aa27.02■■□□□ 1.92
PTPN18-213ENST00000489215 FOSL2P15408 326 aa27.02■■□□□ 1.92
PTPN18-213ENST00000489215 PPP2R5CQ13362 524 aa27.02■■□□□ 1.92
PTPN18-213ENST00000489215 FBXO47Q5MNV8 452 aa27.02■■□□□ 1.92
PTPN18-213ENST00000489215 MYLIPQ8WY64 445 aa27.02■■□□□ 1.92
PTPN18-213ENST00000489215 CA3P07451 260 aa27.01■■□□□ 1.91
PTPN18-213ENST00000489215 GHRP10912 638 aa27.01■■□□□ 1.91
PTPN18-213ENST00000489215 DEFB103AP81534 67 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms