RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 LPXNO60711 386 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 CIITAP33076 1130 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 FBXO47Q5MNV8 452 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 MIS18BP1Q6P0N0 1132 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 GDPD5Q8WTR4 605 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 TOP1MTQ969P6 601 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 ZNF302Q9NR11 478 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 TBC1D22BQ9NU19 505 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 PCDHA2Q9Y5H9 948 aa26.11■■□□□ 1.77
COL9A3-213ENST00000489045 COL4A6Q14031 1691 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 SPTBN5Q9NRC6 3674 aaKnown RBP26.1■■□□□ 1.77
COL9A3-213ENST00000489045 UPP2O95045 317 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 DEXIO95424 95 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 RPLP2P05387 115 aaKnown RBP26.1■■□□□ 1.77
COL9A3-213ENST00000489045 ERVK-21P61565 698 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 TJAP1Q5JTD0 557 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 SP7Q8TDD2 431 aaPredicted RBP26.1■■□□□ 1.77
COL9A3-213ENST00000489045 ATP8B4Q8TF62 1192 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 LENG9Q96B70 501 aa26.1■■□□□ 1.77
COL9A3-213ENST00000489045 ZNF746Q6NUN9 644 aaPredicted RBP26.09■■□□□ 1.77
COL9A3-213ENST00000489045 SWSAP1Q6NVH7 229 aa26.09■■□□□ 1.77
COL9A3-213ENST00000489045 PDXDC2PQ6P474 469 aa26.09■■□□□ 1.77
COL9A3-213ENST00000489045 CPLX2Q6PUV4 134 aaKnown RBP26.09■■□□□ 1.77
COL9A3-213ENST00000489045 MTHFD1LQ6UB35 978 aa26.09■■□□□ 1.77
COL9A3-213ENST00000489045 ATXN2LQ8WWM7 1075 aaKnown RBP26.09■■□□□ 1.77
COL9A3-213ENST00000489045 YME1L1Q96TA2 773 aa26.09■■□□□ 1.77
COL9A3-213ENST00000489045 TCEAL9Q9UHQ7 104 aa26.09■■□□□ 1.77
COL9A3-213ENST00000489045 TTC28Q96AY4 2481 aa26.09■■□□□ 1.77
COL9A3-213ENST00000489045 RALGAPA2Q2PPJ7 1873 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 EDIL3O43854 480 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 HBP1O60381 514 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 TMEM62Q0P6H9 643 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 IER5Q5VY09 327 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 TSHZ1Q6ZSZ6 1077 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 SYMPKQ92797 1274 aaKnown RBP26.08■■□□□ 1.77
COL9A3-213ENST00000489045 TSPYL2Q9H2G4 693 aaPredicted RBP26.08■■□□□ 1.77
COL9A3-213ENST00000489045 PCDHA4Q9UN74 947 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 TRPV2Q9Y5S1 764 aa26.08■■□□□ 1.77
COL9A3-213ENST00000489045 COL1A2P08123 1366 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 SMIM35A0A1B0GVV1 85 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 M0QZ92 97 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 KRT76Q01546 638 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 SMAP1Q8IYB5 467 aaPredicted RBP26.07■■□□□ 1.76
COL9A3-213ENST00000489045 AIFM3Q96NN9 605 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 C17orf80Q9BSJ5 609 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 SUGCTQ9HAC7 445 aa26.07■■□□□ 1.76
COL9A3-213ENST00000489045 TTC3P53804 2025 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 ATP4AP20648 1035 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 KLRC1P26715 233 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 CD52P31358 61 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 USP11P51784 963 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 SCRN1Q12765 414 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 SKIV2LQ15477 1246 aaKnown RBP26.06■■□□□ 1.76
COL9A3-213ENST00000489045 BLIDQ8IZY5 108 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 TBCKQ8TEA7 893 aa26.06■■□□□ 1.76
COL9A3-213ENST00000489045 AGO3Q9H9G7 860 aaKnown RBP26.06■■□□□ 1.76
COL9A3-213ENST00000489045 MSH4O15457 936 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 PSAPP07602 524 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 ANAPC15P60006 121 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 ZNF484Q5JVG2 852 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 CKAP2LQ8IYA6 745 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 FBXO22Q8NEZ5 403 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 ASB2Q96Q27 587 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 C22orf23Q9BZE7 217 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 TPCN1Q9ULQ1 816 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 PCDHA10Q9Y5I2 948 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 MAFBQ9Y5Q3 323 aaPredicted RBP26.05■■□□□ 1.76
COL9A3-213ENST00000489045 SQORQ9Y6N5 450 aa26.05■■□□□ 1.76
COL9A3-213ENST00000489045 ZBTB42B2RXF5 422 aa26.04■■□□□ 1.76
COL9A3-213ENST00000489045 M0R2N6 131 aa26.04■■□□□ 1.76
COL9A3-213ENST00000489045 MRPS5P82675 430 aaKnown RBP26.04■■□□□ 1.76
COL9A3-213ENST00000489045 NPY5RQ15761 445 aa26.04■■□□□ 1.76
COL9A3-213ENST00000489045 DAGLBQ8NCG7 672 aa26.04■■□□□ 1.76
COL9A3-213ENST00000489045 CELF4Q9BZC1 486 aaKnown RBP26.04■■□□□ 1.76
COL9A3-213ENST00000489045 SLKQ9H2G2 1235 aaPredicted RBP26.04■■□□□ 1.76
COL9A3-213ENST00000489045 GABBR1Q9UBS5 961 aa26.04■■□□□ 1.76
COL9A3-213ENST00000489045 SAMM50Q9Y512 469 aa26.04■■□□□ 1.76
COL9A3-213ENST00000489045 ENPP3O14638 875 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 CDKL5O76039 1030 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 FAM177A1Q8N128 213 aaPredicted RBP26.03■■□□□ 1.76
COL9A3-213ENST00000489045 NME8Q8N427 588 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 LINC01599Q8WXQ3 324 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 BBXQ8WY36 941 aaPredicted RBP26.03■■□□□ 1.76
COL9A3-213ENST00000489045 LMCD1Q9NZU5 365 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 IGSF9BQ9UPX0 1349 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 KDM3AQ9Y4C1 1321 aa26.03■■□□□ 1.76
COL9A3-213ENST00000489045 WDR64B1ANS9 1081 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 PFKFB2O60825 505 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 GALNT17Q6IS24 598 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 TRMT1LQ7Z2T5 733 aaKnown RBP26.02■■□□□ 1.76
COL9A3-213ENST00000489045 SLC5A5Q92911 643 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 SAMD11Q96NU1 681 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 PADI3Q9ULW8 664 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 KCNJ14Q9UNX9 436 aa26.02■■□□□ 1.76
COL9A3-213ENST00000489045 GAS7O60861 476 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 TDP2O95551 362 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 AK2P54819 239 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 TFF2Q03403 129 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 PAK2Q13177 524 aa26.01■■□□□ 1.75
COL9A3-213ENST00000489045 Q4G0T1 1027 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms