RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 NELFCDQ8IXH7 590 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.31■■□□□ 16e-8■■□□□ 11.7
HMG20B-213ENST00000488973 EMILIN3Q9NT22 766 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 TBC1D7Q9P0N9 293 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 NARFQ9UHQ1 456 aa21.31■■□□□ 1
HMG20B-213ENST00000488973 CETN3O15182 167 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 SART1O43290 800 aaKnown RBP21.3■■□□□ 1
HMG20B-213ENST00000488973 ANXA13P27216 316 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 TNNI2P48788 182 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 ZNF571Q7Z3V5 609 aaPredicted RBP21.3■■□□□ 1
HMG20B-213ENST00000488973 ITFG2Q969R8 447 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 CENPHQ9H3R5 247 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 ACTR5Q9H9F9 607 aaPredicted RBP21.3■■□□□ 1
HMG20B-213ENST00000488973 KANSL2Q9H9L4 492 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 TRAPPC3O43617 180 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 TM4SF1P30408 202 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 DPY19L2P1Q6NXN4 242 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 CCDC13Q8IYE1 715 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 SETDB2Q96T68 719 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 NAGPAQ9UK23 515 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 CCNL1Q9UK58 526 aaPredicted RBP21.3■■□□□ 1
HMG20B-213ENST00000488973 PCDHA12Q9UN75 941 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 LEMD3Q9Y2U8 911 aa21.3■■□□□ 1
HMG20B-213ENST00000488973 SLC26A4O43511 780 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 SSBP05455 408 aaKnown RBP eCLIP21.29■■□□□ 1
HMG20B-213ENST00000488973 BTDP43251 543 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 CLK2P49760 499 aaKnown RBP21.29■■□□□ 1
HMG20B-213ENST00000488973 HERC4Q5GLZ8 1057 aaPredicted RBP21.29■■□□□ 1
HMG20B-213ENST00000488973 GIMAP7Q8NHV1 300 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 FAXDC2Q96IV6 333 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 NOC2LQ9Y3T9 749 aaKnown RBP21.29■■□□□ 1
HMG20B-213ENST00000488973 FOCADQ5VW36 1801 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 FRMPD2Q68DX3 1309 aaPredicted RBP21.29■■□□□ 1
HMG20B-213ENST00000488973 RASSF9O75901 435 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 GCFC2P16383 781 aaKnown RBP21.29■■□□□ 1
HMG20B-213ENST00000488973 PRKCIP41743 596 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 TEX11Q8IYF3 940 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 SLITRK6Q9H5Y7 841 aa21.29■■□□□ 1
HMG20B-213ENST00000488973 GPR75-ASB3A0A0A6YYF3 556 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 ANKRD33BA6NCL7 494 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 MARCH6O60337 910 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 PAEPP09466 180 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 PLA2G4BP0C869 781 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 PPP2R2AP63151 447 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 CCDC121Q6ZUS5 278 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 FRMD5Q7Z6J6 570 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 SLFN11Q7Z7L1 901 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 DDX42Q86XP3 938 aaKnown RBP eCLIP21.28■■□□□ 1
HMG20B-213ENST00000488973 RASGEF1CQ8N431 466 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 METTL13Q8N6R0 699 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 OR2W6PQ8NHA6 318 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 TPCN2Q8NHX9 752 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 LMBR1Q8WVP7 490 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 SPAG5Q96R06 1193 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 NEUROG2Q9H2A3 272 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 KLC4Q9NSK0 619 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 HDAC9Q9UKV0 1011 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 FRMD3A2A2Y4 597 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 E9PMD0 336 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 CHUKO15111 745 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 UCHL3P15374 230 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 PLCG2P16885 1265 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 SCP2P22307 547 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 ALKBH5Q6P6C2 394 aaKnown RBP21.28■■□□□ 1
HMG20B-213ENST00000488973 ARMC9Q7Z3E5 817 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 SEPT12Q8IYM1 358 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 ANKIB1Q9P2G1 1089 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 DDX20Q9UHI6 824 aaKnown RBP21.28■■□□□ 1
HMG20B-213ENST00000488973 FBXL5Q9UKA1 691 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 KIAA1024Q9UPX6 916 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 PLIN4Q96Q06 1357 aa21.28■■□□□ 1
HMG20B-213ENST00000488973 FLOT1O75955 427 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 SNHG28P0DPA3 235 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 FAM182BQ5T319 152 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 TPTE2Q6XPS3 522 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 ZNF804AQ7Z570 1209 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 GPBP1Q86WP2 473 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 SEC14L1Q92503 715 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 AP1M1Q9BXS5 423 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 SUCLA2Q9P2R7 463 aaPredicted RBP21.27■■□□□ 1
HMG20B-213ENST00000488973 NENFQ9UMX5 172 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 A0A0A6YYK5 440 aaPredicted RBP21.27■■□□□ 1
HMG20B-213ENST00000488973 PNMA6FA0A0J9YX94 578 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 C5orf60A6NFR6 353 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 KRIT1O00522 736 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 CCDC26Q8TAB7 109 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 NAP1L4Q99733 375 aaKnown RBP21.27■■□□□ 1
HMG20B-213ENST00000488973 DDX47Q9H0S4 455 aaKnown RBP21.27■■□□□ 1
HMG20B-213ENST00000488973 STXBP5LQ9Y2K9 1186 aa21.27■■□□□ 1
HMG20B-213ENST00000488973 PITPNM2Q9BZ72 1349 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 ACTN1P12814 892 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 CYP11B2P19099 503 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 SLC9A1P19634 815 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 NR2F2P24468 414 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 UBLCP1Q8WVY7 318 aaPredicted RBP21.26■□□□□ 0.99
HMG20B-213ENST00000488973 CUL5Q93034 780 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 GOLPH3Q9H4A6 298 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 RTCBQ9Y3I0 505 aaKnown RBP21.26■□□□□ 0.99
HMG20B-213ENST00000488973 GOLGA6L7A0A1B0GV03 622 aa21.26■□□□□ 0.99
HMG20B-213ENST00000488973 GNPATO15228 680 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms