RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 PCDHA6Q9UN73 950 aa12.35□□□□□ -0.43
YIPF3-207ENST00000488966 TRPC6Q9Y210 931 aa12.35□□□□□ -0.43
YIPF3-207ENST00000488966 PCDHA8Q9Y5H6 950 aa12.35□□□□□ -0.43
YIPF3-207ENST00000488966 PCDHA2Q9Y5H9 948 aa12.35□□□□□ -0.43
YIPF3-207ENST00000488966 RBM8AQ9Y5S9 174 aaKnown RBP12.35□□□□□ -0.43
YIPF3-207ENST00000488966 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
YIPF3-207ENST00000488966 TTC3P53804 2025 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 TMEM221A6NGB7 291 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 SPDYE3A6NKU9 549 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 LOC730098B7Z3J9 87 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 M0QZ92 97 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 M0R296 226 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 MAFGO15525 162 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 PRC1O43663 620 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 STAG3L1P0CL83 205 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 IBSPP21815 317 aaPredicted RBP12.34□□□□□ -0.43
YIPF3-207ENST00000488966 ACTR2P61160 394 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 RBM10P98175 930 aaKnown RBP12.34□□□□□ -0.43
YIPF3-207ENST00000488966 PAK2Q13177 524 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 PLCB4Q15147 1175 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 NFXL1Q6ZNB6 911 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 TRIM67Q6ZTA4 783 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 RAB11FIP4Q86YS3 637 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 PRSS33Q8NF86 280 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 CYP2W1Q8TAV3 490 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 TLE6Q9H808 572 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 KCNH7Q9NS40 1196 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 SLC9A2Q9UBY0 812 aa12.34□□□□□ -0.43
YIPF3-207ENST00000488966 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
YIPF3-207ENST00000488966 ATG2AQ2TAZ0 1938 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 SH2B2O14492 632 aaPredicted RBP12.33□□□□□ -0.44
YIPF3-207ENST00000488966 PER2O15055 1255 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 KRT76Q01546 638 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 NFX1Q12986 1120 aaKnown RBP12.33□□□□□ -0.44
YIPF3-207ENST00000488966 CBX2Q14781 532 aaPredicted RBP12.33□□□□□ -0.44
YIPF3-207ENST00000488966 CCDC82Q8N4S0 544 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 VN1R2Q8NFZ6 395 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 MXRA8Q9BRK3 442 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 AZI2Q9H6S1 392 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 LRFN2Q9ULH4 789 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 KDM3AQ9Y4C1 1321 aa12.33□□□□□ -0.44
YIPF3-207ENST00000488966 SMIM35A0A1B0GVV1 85 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 CCDC69A6NI79 296 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 MGEA5O60502 916 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 ARP10275 920 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 MCM5P33992 734 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 SARSP49591 514 aaKnown RBP12.32□□□□□ -0.44
YIPF3-207ENST00000488966 STAT5BP51692 787 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 ZXDAP98168 799 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 MTHFD1LQ6UB35 978 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 PLPPR4Q7Z2D5 763 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 HEATR3Q7Z4Q2 680 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 NME8Q8N427 588 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 TNPO1Q92973 898 aaKnown RBP12.32□□□□□ -0.44
YIPF3-207ENST00000488966 TMEM87BQ96K49 555 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 RPGRIP1Q96KN7 1286 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 CDHR5Q9HBB8 845 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 ERVK-5Q9HDB9 667 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 PCDHB7Q9Y5E2 793 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 NFASCO94856 1347 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 TECTAO75443 2155 aa12.32□□□□□ -0.44
YIPF3-207ENST00000488966 ZNF318Q5VUA4 2279 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 ATG7O95352 703 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 ERVFC1P60507 584 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 TCF15Q12870 199 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
YIPF3-207ENST00000488966 FAM102BQ5T8I3 360 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 TMTC3Q6ZXV5 915 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 TMEM40Q8WWA1 233 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 SUSD6Q92537 303 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 ADAM2Q99965 735 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 PHF7Q9BWX1 381 aaPredicted RBP12.31□□□□□ -0.44
YIPF3-207ENST00000488966 AGO4Q9HCK5 861 aaKnown RBP12.31□□□□□ -0.44
YIPF3-207ENST00000488966 NOC2LQ9Y3T9 749 aaKnown RBP12.31□□□□□ -0.44
YIPF3-207ENST00000488966 PCDHB12Q9Y5F1 795 aa12.31□□□□□ -0.44
YIPF3-207ENST00000488966 IGKV6D-21A0A0A0MT36 114 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 TBKBP1A7MCY6 615 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 C9IYK1 514 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 RPS6KA5O75582 802 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 FGF18O76093 207 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 CCNE2O96020 404 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 CALM1P0DP23 149 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 CALM2P0DP24 149 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 CALM3P0DP25 149 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 KLRC1P26715 233 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 LIFRP42702 1097 aa12.3□□□□□ -0.44
YIPF3-207ENST00000488966 PTPN5P54829 565 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms