RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 ZNF252P-AS1Q0IIN9 211 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 CRHR2Q13324 411 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 KIF22Q14807 665 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 GIMAP6Q6P9H5 292 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 PRRT2Q7Z6L0 340 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-207ENST00000488934 PI4K2BQ8TCG2 481 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 GPBAR1Q8TDU6 330 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 ZNF296Q8WUU4 475 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-207ENST00000488934 BRI3BPQ8WY22 251 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 EVI5LQ96CN4 794 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 EDC3Q96F86 508 aaKnown RBP6.1□□□□□ -1.43
SF3A3-207ENST00000488934 FSD1Q9BTV5 496 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 NACAP1Q9BZK3 213 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 CABP5Q9NP86 173 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 DISC1Q9NRI5 854 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 SAP30BPQ9UHR5 308 aaKnown RBP6.1□□□□□ -1.43
SF3A3-207ENST00000488934 AFG3L2Q9Y4W6 797 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 PCDHGC5Q9Y5F6 944 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 AK5Q9Y6K8 562 aa6.1□□□□□ -1.43
SF3A3-207ENST00000488934 MGAMO43451 1857 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 SALL3Q9BXA9 1300 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 TRIM75PA6NK02 468 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 BTBD19C9JJ37 291 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 ADMP35318 185 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 USP14P54578 494 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 PDE1AP54750 535 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 MFAP1P55081 439 aaKnown RBP6.09□□□□□ -1.43
SF3A3-207ENST00000488934 SP3Q02447 781 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 TTLL4Q14679 1199 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 CERKLQ49MI3 558 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-207ENST00000488934 ZC3H12AQ5D1E8 599 aaKnown RBP6.09□□□□□ -1.43
SF3A3-207ENST00000488934 PCNX4Q63HM2 1172 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 TATDN1Q6P1N9 297 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 OGFOD3Q6PK18 319 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 GADL1Q6ZQY3 521 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 CHD1LQ86WJ1 897 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 LCORLQ8N3X6 602 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 KCT2Q8NC54 265 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 RNF214Q8ND24 703 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 EXOC6Q8TAG9 804 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 SMCR8Q8TEV9 937 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-207ENST00000488934 SDR42E1Q8WUS8 393 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 PTPN18Q99952 460 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 ARMT1Q9H993 441 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 DCP1AQ9NPI6 582 aaPredicted RBP6.09□□□□□ -1.43
SF3A3-207ENST00000488934 TMOD4Q9NZQ9 345 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 STAP2Q9UGK3 403 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 ZBTB21Q9ULJ3 1066 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 AGTPBP1Q9UPW5 1226 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 SLC4A4Q9Y6R1 1079 aa6.09□□□□□ -1.43
SF3A3-207ENST00000488934 FAM170BA6NMN3 283 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 HIP1O00291 1037 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 PDHXO00330 501 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 GPAA1O43292 621 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 MED26O95402 600 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 SLC3A2P08195 630 aaKnown RBP6.08□□□□□ -1.44
SF3A3-207ENST00000488934 BMP6P22004 513 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 TDO2P48775 406 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 GP2P55259 537 aaKnown RBP6.08□□□□□ -1.44
SF3A3-207ENST00000488934 PRMT2P55345 433 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 BACE1P56817 501 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 NUCB1Q02818 461 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 SPP2Q13103 211 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 PSMD2Q13200 908 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 ABCB5Q2M3G0 1257 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 TSHZ3Q63HK5 1081 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 SEZ6L2Q6UXD5 910 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 TMEM179Q6ZVK1 233 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 ZNF765Q7L2R6 523 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.08□□□□□ -1.44
SF3A3-207ENST00000488934 FAM43AQ8N2R8 423 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 STK35Q8TDR2 534 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 GATA6Q92908 595 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 ELMO3Q96BJ8 720 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 ABHD8Q96I13 439 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 CCDC17Q96LX7 622 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 FEZ1Q99689 392 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 DUSP9Q99956 384 aaKnown RBP6.08□□□□□ -1.44
SF3A3-207ENST00000488934 LNPKQ9C0E8 428 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 MCOLN1Q9GZU1 580 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 SH2D4AQ9H788 454 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 DNAJC18Q9H819 358 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 LRRC4CQ9HCJ2 640 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 C1GALT1Q9NS00 363 aa6.08□□□□□ -1.44
SF3A3-207ENST00000488934 ROBO3Q96MS0 1386 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 MPHOSPH10O00566 681 aaKnown RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 GH2P01242 217 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 APPP05067 770 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 HOXD10P28358 340 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 NT5C2P49902 561 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 PLCD1P51178 756 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 IRAK1P51617 712 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 HMGCS2P54868 508 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 IRX3P78415 501 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 LACTBP83111 547 aaPredicted RBP6.07□□□□□ -1.44
SF3A3-207ENST00000488934 GABPAQ06546 454 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 RAB3GAP1Q15042 981 aa6.07□□□□□ -1.44
SF3A3-207ENST00000488934 CCDC85BQ15834 202 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms