RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 GABREP78334 506 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 ST5P78524 1137 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 IL13RA1P78552 427 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 TOP3AQ13472 1001 aaPredicted RBP6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 USP10Q14694 798 aaKnown RBP6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 FIGNQ5HY92 759 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 NBPF6Q5VWK0 638 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 CISD2Q8N5K1 135 aaKnown RBP6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 SLC16A11Q8NCK7 471 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 SLC7A14Q8TBB6 771 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 NBPF4Q96M43 638 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 IPO9Q96P70 1041 aaKnown RBP6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 SCAND2PQ9GZW5 306 aaPredicted RBP6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 SEC61A2Q9H9S3 476 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 BTBD7Q9P203 1132 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 ARHGAP28Q9P2N2 729 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 RASGRP1O95267 797 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 CRY1Q16526 586 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 RNF151Q2KHN1 245 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 SPDYAQ5MJ70 313 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 LRSAM1Q6UWE0 723 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 TAX1BP1Q86VP1 789 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 CERS3Q8IU89 383 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 ZC3H7AQ8IWR0 971 aaKnown RBP6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 REXO1L1PQ8IX06 675 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 NEIL1Q96FI4 390 aaPredicted RBP6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 DEPDC7Q96QD5 511 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 CARD11Q9BXL7 1154 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 SNTG2Q9NY99 539 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 NDOR1Q9UHB4 597 aa6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 ARID4BQ4LE39 1312 aaPredicted RBP6.73□□□□□ -1.33
CTNNB1-215ENST00000488914 PRAMEF25A6NGN4 478 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 MPIG6BO95866 241 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 C6P13671 934 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 PTGS1P23219 599 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 AOAHP28039 575 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 ADCY8P40145 1251 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 SELENOPP49908 381 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 TBR1Q16650 682 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 LARP4Q71RC2 724 aaKnown RBP eCLIP6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 SCLYQ96I15 445 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 DNAJC7Q99615 494 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 AMNQ9BXJ7 453 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 INCENPQ9NQS7 918 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 COQ6Q9Y2Z9 468 aa6.72□□□□□ -1.33
CTNNB1-215ENST00000488914 AMHP03971 560 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 CANXP27824 592 aaKnown RBP6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 RBL2Q08999 1139 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 WDR72Q3MJ13 1102 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 IFNL2Q8IZJ0 200 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 GSTCDQ8NEC7 633 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 UCKL1Q9NWZ5 548 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 GALNT8Q9NY28 637 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 CDC42EP3Q9UKI2 254 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 ZFR2Q9UPR6 939 aaKnown RBP6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.34
CTNNB1-215ENST00000488914 MATN2O00339 956 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 SCDO00767 359 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 MUSKO15146 869 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 CLASP2O75122 1294 aaKnown RBP6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 MMEP08473 750 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 TACR2P21452 398 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 GJA4P35212 333 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 KCNQ1P51787 676 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 CRIP3Q6Q6R5 217 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 DPP8Q6V1X1 898 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 EP400NLQ6ZTU2 488 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 NOSTRINQ8IVI9 506 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 FUKQ8N0W3 1084 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 GIMAP8Q8ND71 665 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 CDK5RAP1Q96SZ6 601 aaKnown RBP6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 DPYSL5Q9BPU6 564 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 ZDHHC5Q9C0B5 715 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 KIAA1683Q9H0B3 1180 aa6.7□□□□□ -1.34
CTNNB1-215ENST00000488914 RASSF10A6NK89 507 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 KCNA6P17658 529 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 CD83Q01151 205 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 LONRF2Q1L5Z9 754 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 FAM47CQ5HY64 1035 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 ABHD17CQ6PCB6 329 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 C8orf37Q96NL8 207 aa6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 HIRIP3Q9BW71 556 aaPredicted RBP6.69□□□□□ -1.34
CTNNB1-215ENST00000488914 CUTAO60888 179 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 ETV4P43268 484 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 RAC3P60763 192 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 STILQ15468 1287 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 OVCH1Q7RTY7 1134 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 FGD2Q7Z6J4 655 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 VPS11Q9H270 941 aa6.68□□□□□ -1.34
CTNNB1-215ENST00000488914 GSTA4O15217 222 aa6.67□□□□□ -1.34
CTNNB1-215ENST00000488914 SLPIP03973 132 aa6.67□□□□□ -1.34
CTNNB1-215ENST00000488914 NAT1P18440 290 aa6.67□□□□□ -1.34
CTNNB1-215ENST00000488914 ECE1P42892 770 aa6.67□□□□□ -1.34
CTNNB1-215ENST00000488914 HERVK_113P62684 666 aa6.67□□□□□ -1.34
CTNNB1-215ENST00000488914 AGBL4Q5VU57 503 aa6.67□□□□□ -1.34
CTNNB1-215ENST00000488914 KANK2Q63ZY3 851 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms