RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 TMEM150BA6NC51 233 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 PSAPP07602 524 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 YWHABP31946 246 aaKnown RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 STX17P56962 302 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 CT47A1Q5JQC4 288 aaPredicted RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 SWSAP1Q6NVH7 229 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 CCDC62Q6P9F0 684 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 MAMDC4Q6UXC1 1216 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 TRMT1LQ7Z2T5 733 aaKnown RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 MTERF4Q7Z6M4 381 aaKnown RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 ADSSL1Q8N142 457 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 SLC39A2Q9NP94 309 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 DIS3Q9Y2L1 958 aaKnown RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 RSPH10B2B2RC85 870 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 ZNF862O60290 1169 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 SUPT20HL2P0C7V6 817 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 RSPH10BP0C881 870 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 MIS18BP1Q6P0N0 1132 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 METTL7BQ6UX53 244 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 CCDC65Q8IXS2 484 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 GLIS3Q8NEA6 775 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 ENOX1Q8TC92 643 aaKnown RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 ATP6V0A1Q93050 837 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 SH2D3AQ9BRG2 576 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 KATNBL1Q9H079 304 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
COL21A1-211ENST00000488912 NFE2L3Q9Y4A8 694 aa12.14□□□□□ -0.47
COL21A1-211ENST00000488912 IGSF9BQ9UPX0 1349 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 ATG7O95352 703 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 ADCY5O95622 1261 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 SNAI1O95863 264 aaPredicted RBP12.13□□□□□ -0.47
COL21A1-211ENST00000488912 RARRES1P49788 294 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 CCDC173Q0VFZ6 552 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 PAK1Q13153 545 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 MAP2K5Q13163 448 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 PLA2G4FQ68DD2 849 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 NELFBQ8WX92 580 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 ZHX3Q9H4I2 956 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 MLXIPQ9HAP2 919 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 VTA1Q9NP79 307 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 FANCLQ9NW38 375 aa12.13□□□□□ -0.47
COL21A1-211ENST00000488912 DBR1Q9UK59 544 aaKnown RBP12.13□□□□□ -0.47
COL21A1-211ENST00000488912 GSTTP1A0A1W2PQM5 241 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 BACH1O14867 736 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PTGS1P23219 599 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 CTGFP29279 349 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 HERC4Q5GLZ8 1057 aaPredicted RBP12.12□□□□□ -0.47
COL21A1-211ENST00000488912 FAM26FQ5R3K3 315 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 ANO5Q75V66 913 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 ZSCAN30Q86W11 494 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 COPS5Q92905 334 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TINF2Q9BSI4 451 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 FGFBP2Q9BYJ0 223 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 KCND2Q9NZV8 630 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TBC1D7Q9P0N9 293 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 RWDD2AQ9UIY3 292 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PSMA7O14818 248 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TBCAO75347 108 aaKnown RBP12.12□□□□□ -0.47
COL21A1-211ENST00000488912 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 ATP1A3P13637 1013 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PMS1P54277 932 aaKnown RBP12.12□□□□□ -0.47
COL21A1-211ENST00000488912 TPM4P67936 248 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PRKCEQ02156 737 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PSMD2Q13200 908 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 STIM1Q13586 685 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 HSDL1Q3SXM5 330 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 SFR1Q86XK3 245 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PDLIM2Q96JY6 352 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 GTPBP4Q9BZE4 634 aaKnown RBP12.12□□□□□ -0.47
COL21A1-211ENST00000488912 SLC5A4Q9NY91 659 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 PCDHA2Q9Y5H9 948 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 CENPFP49454 3210 aa12.12□□□□□ -0.47
COL21A1-211ENST00000488912 IGKV6D-21A0A0A0MT36 114 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 STBD1O95210 358 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 NPEPPSP55786 919 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 LRRC41Q15345 812 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 SARM1Q6SZW1 724 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 USP6NLQ92738 828 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 CCDC43Q96MW1 224 aaKnown RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
COL21A1-211ENST00000488912 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
COL21A1-211ENST00000488912 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms