RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CHRDL2Q6WN34 429 aa20.99■□□□□ 0.95
PTCD3-217ENST00000488801 RPAINQ86UA6 219 aa20.99■□□□□ 0.95
PTCD3-217ENST00000488801 FAM167AQ96KS9 214 aa20.99■□□□□ 0.95
PTCD3-217ENST00000488801 TTC12Q9H892 705 aaPredicted RBP20.99■□□□□ 0.95
PTCD3-217ENST00000488801 TUBE1Q9UJT0 475 aa20.99■□□□□ 0.95
PTCD3-217ENST00000488801 NOD1Q9Y239 953 aa20.99■□□□□ 0.95
PTCD3-217ENST00000488801 SAMM50Q9Y512 469 aa20.99■□□□□ 0.95
PTCD3-217ENST00000488801 VPS37CA5D8V6 355 aaPredicted RBP20.98■□□□□ 0.95
PTCD3-217ENST00000488801 RRN3P2A6NIE6 340 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 CAND2O75155 1236 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 PRKCEQ02156 737 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 BFSP2Q13515 415 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 EPHA7Q15375 998 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 CCDC155Q8N6L0 562 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 LBHD1Q9BQE6 289 aaPredicted RBP20.98■□□□□ 0.95
PTCD3-217ENST00000488801 PCDHA12Q9UN75 941 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 TRPC6Q9Y210 931 aa20.98■□□□□ 0.95
PTCD3-217ENST00000488801 A0A1W2PPC1 479 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 LAD1O00515 517 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 STX6O43752 255 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 OATP04181 439 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 CKBP12277 381 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 EPHB4P54760 987 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 FPGSQ05932 587 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 TRAPPC12Q8WVT3 735 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 TNPO1Q92973 898 aaKnown RBP20.97■□□□□ 0.95
PTCD3-217ENST00000488801 CEP89Q96ST8 783 aa20.97■□□□□ 0.95
PTCD3-217ENST00000488801 WRAP73Q9P2S5 460 aaPredicted RBP20.97■□□□□ 0.95
PTCD3-217ENST00000488801 COLQQ9Y215 455 aaPredicted RBP20.97■□□□□ 0.95
PTCD3-217ENST00000488801 POTEMA6NI47 508 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 IQCF3P0C7M6 154 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 CSF2RAP15509 400 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 PRPHP41219 470 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 TXKP42681 527 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 FXR2P51116 673 aaKnown RBP eCLIP20.96■□□□□ 0.95
PTCD3-217ENST00000488801 PSMC5P62195 406 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 ATP2C1P98194 919 aaPredicted RBP20.96■□□□□ 0.95
PTCD3-217ENST00000488801 PTGDRQ13258 359 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 GPNMBQ14956 572 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 TARBP2Q15633 366 aaKnown RBP20.96■□□□□ 0.95
PTCD3-217ENST00000488801 ZNF484Q5JVG2 852 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 NCAPH2Q6IBW4 605 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 TAF2Q6P1X5 1199 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 RUFY4Q6ZNE9 571 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 FERMT3Q86UX7 667 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 LINC01465Q8N7H1 131 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 BANK1Q8NDB2 785 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 HSD17B14Q9BPX1 270 aa20.96■□□□□ 0.95
PTCD3-217ENST00000488801 C22orf31O95567 290 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 P4HBP07237 508 aaKnown RBP20.95■□□□□ 0.94
PTCD3-217ENST00000488801 SELPP16109 830 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 RFC2P35250 354 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 QARSP47897 775 aaKnown RBP20.95■□□□□ 0.94
PTCD3-217ENST00000488801 PPIGQ13427 754 aaKnown RBP eCLIP20.95■□□□□ 0.948e-10■□□□□ 9.6
PTCD3-217ENST00000488801 MBTPS1Q14703 1052 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 MTHFD1LQ6UB35 978 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 LRRC8DQ7L1W4 858 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 C16orf59Q7L2K0 433 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 TMEM199Q8N511 208 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 NEK9Q8TD19 979 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 SCLYQ96I15 445 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 LXNQ9BS40 222 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 NIFKQ9BYG3 293 aaKnown RBP20.95■□□□□ 0.94
PTCD3-217ENST00000488801 PCDHA2Q9Y5H9 948 aa20.95■□□□□ 0.94
PTCD3-217ENST00000488801 LAMA2P24043 3122 aaKnown RBP20.95■□□□□ 0.94
PTCD3-217ENST00000488801 MARCH6O60337 910 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 LYPLA2O95372 231 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 CCL23P55773 120 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 XKR3Q5GH77 459 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 FAM26DQ5JW98 314 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 ZNF618Q5T7W0 954 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 ANO5Q75V66 913 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 C4orf19Q8IY42 314 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 IGSF22Q8N9C0 903 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 ZBTB10Q96DT7 871 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 EIF2AK1Q9BQI3 630 aaKnown RBP20.94■□□□□ 0.94
PTCD3-217ENST00000488801 IL23AQ9NPF7 189 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 CEP131Q9UPN4 1083 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 TTC3P53804 2025 aa20.94■□□□□ 0.94
PTCD3-217ENST00000488801 SMIM35A0A1B0GVV1 85 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 SLITRK3O94933 977 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 CXCL10P02778 98 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 RPLP2P05387 115 aaKnown RBP20.93■□□□□ 0.94
PTCD3-217ENST00000488801 PDIA4P13667 645 aaKnown RBP20.93■□□□□ 0.94
PTCD3-217ENST00000488801 IGBP1P78318 339 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 MGAT3Q09327 533 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 IL17AQ16552 155 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 DYDC2Q96IM9 177 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 UBE2OQ9C0C9 1292 aaKnown RBP20.93■□□□□ 0.94
PTCD3-217ENST00000488801 RGL1Q9NZL6 768 aa20.93■□□□□ 0.94
PTCD3-217ENST00000488801 PARNO95453 639 aaKnown RBP20.92■□□□□ 0.94
PTCD3-217ENST00000488801 PFKMP08237 780 aa20.92■□□□□ 0.94
PTCD3-217ENST00000488801 SPATA31C1P0DKV0 1188 aa20.92■□□□□ 0.94
PTCD3-217ENST00000488801 RASIP1Q5U651 963 aa20.92■□□□□ 0.94
PTCD3-217ENST00000488801 CKAP2LQ8IYA6 745 aa20.92■□□□□ 0.94
PTCD3-217ENST00000488801 TDHQ8IZJ6 230 aa20.92■□□□□ 0.94
PTCD3-217ENST00000488801 MORC2Q9Y6X9 1032 aaPredicted RBP20.92■□□□□ 0.94
PTCD3-217ENST00000488801 IGKV6-21A0A0C4DH24 114 aa20.91■□□□□ 0.94
PTCD3-217ENST00000488801 TMEM150BA6NC51 233 aa20.91■□□□□ 0.94
PTCD3-217ENST00000488801 DKC1O60832 514 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms