RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MGAT3Q09327 533 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 MKRN4PQ13434 485 aaPredicted RBP18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 PLEKHG4Q58EX7 1191 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 DBF4BQ8NFT6 615 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 DNAJB3Q8WWF6 145 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 HAS1Q92839 578 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 BACH2Q9BYV9 841 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 GABBR1Q9UBS5 961 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 PCDHA2Q9Y5H9 948 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
CTDSP1-209ENST00000488627 TET1Q8NFU7 2136 aa18.02■□□□□ 0.47
CTDSP1-209ENST00000488627 IGSF9BQ9UPX0 1349 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 TRIP12Q14669 1992 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 WNT7AO00755 349 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 ST18O60284 1047 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 CCNT1O60563 726 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 SFNP31947 248 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 RABGGTBP53611 331 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 HMGN5P82970 282 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 ZNF697Q5TEC3 545 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 MTHFD1LQ6UB35 978 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 RDM1Q8NG50 284 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 PHOSPHO2Q8TCD6 241 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 TIFAQ96CG3 184 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 FAM20AQ96MK3 541 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 FAM161BQ96MY7 647 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 GUCD1Q96NT3 240 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 YBX2Q9Y2T7 364 aaKnown RBP18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 SAMM50Q9Y512 469 aa18.01■□□□□ 0.47
CTDSP1-209ENST00000488627 SCN5AQ14524 2016 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 ABHD14A-ACY1A0A1B0GW23 586 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 CHMP2AO43633 222 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 KLRC1P26715 233 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 JAK3P52333 1124 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 WDR5P61964 334 aaKnown RBP18■□□□□ 0.47
CTDSP1-209ENST00000488627 GUCY1B3Q02153 619 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 TRIM29Q14134 588 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 UGCGQ16739 394 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 ZNF484Q5JVG2 852 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 FBXO18Q8NFZ0 1043 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 TMX3Q96JJ7 454 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 C8orf76Q96K31 380 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 TCEAL9Q9UHQ7 104 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 VAV3Q9UKW4 847 aa18■□□□□ 0.47
CTDSP1-209ENST00000488627 SMIM35A0A1B0GVV1 85 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 EML1O00423 815 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 TBX3O15119 743 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 STBD1O95210 358 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 MYOGP15173 224 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 PPP2R5CQ13362 524 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 IKBKEQ14164 716 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 RAB30Q15771 203 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 MIER3Q7Z3K6 550 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 RSPH3Q86UC2 560 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 SLC9A7Q96T83 725 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 NAP1L4Q99733 375 aaKnown RBP17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 FAM49AQ9H0Q0 323 aaPredicted RBP17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 COL1A2P08123 1366 aa17.99■□□□□ 0.47
CTDSP1-209ENST00000488627 DEFB103AP81534 67 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 MRPS6P82932 125 aaKnown RBP17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 HERC6Q8IVU3 1022 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 CKAP2LQ8IYA6 745 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 KIAA0319LQ8IZA0 1049 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 ZNF576Q9H609 170 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 PCDHA11Q9Y5I1 949 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 CDY2AQ9Y6F7 541 aa17.98■□□□□ 0.47
CTDSP1-209ENST00000488627 TANC1Q9C0D5 1861 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 C22orf31O95567 290 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 RPLP2P05387 115 aaKnown RBP17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 PRKCEQ02156 737 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 SPIRE1Q08AE8 756 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 LPIN1Q14693 890 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 GRIN2CQ14957 1233 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 FBXO47Q5MNV8 452 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 TRMT1LQ7Z2T5 733 aaKnown RBP17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 NME8Q8N427 588 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 SEPT8Q92599 483 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 FAM167AQ96KS9 214 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 NKX2-4Q9H2Z4 354 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 MSRAQ9UJ68 235 aa17.97■□□□□ 0.47
CTDSP1-209ENST00000488627 EFCAB14O75071 495 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 OATP04181 439 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 GHRP10912 638 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 KCNJ6P48051 423 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 MCM2P49736 904 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 TARBP2Q15633 366 aaKnown RBP17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 IER5Q5VY09 327 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 TMCO2Q7Z6W1 182 aaPredicted RBP17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 LINC01465Q8N7H1 131 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 FAM184AQ8NB25 1140 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
CTDSP1-209ENST00000488627 AGO3Q9H9G7 860 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms