RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ITGB1P05556 798 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 SCG2P13521 617 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 RXRAP19793 462 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 SLC26A2P50443 739 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 STAT5BP51692 787 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 HFE2Q6ZVN8 426 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 TMTC3Q6ZXV5 915 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 HEATR3Q7Z4Q2 680 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 RNF135Q8IUD6 432 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 EFHBQ8N7U6 833 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 FANCBQ8NB91 859 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 SPPL3Q8TCT6 385 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 ZBTB10Q96DT7 871 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 MSLNLQ96KJ4 702 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 FBXL18Q96ME1 805 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 MXRA8Q9BRK3 442 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 MUTYHQ9UIF7 546 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 KDM3AQ9Y4C1 1321 aa21.78■■□□□ 1.08
GGPS1-206ENST00000488594 SMIM35A0A1B0GVV1 85 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 CSPG5O95196 566 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 ACTR2P61160 394 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 NHLH1Q02575 133 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 PLCB4Q15147 1175 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 KLHL23Q8NBE8 558 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
GGPS1-206ENST00000488594 LRFN2Q9ULH4 789 aa21.77■■□□□ 1.08
GGPS1-206ENST00000488594 hCG_1642624A0A1W2PR95 340 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 DNAJB1P25685 340 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 MRE11P49959 708 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 KRT76Q01546 638 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 TMEM62Q0P6H9 643 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 COASYQ13057 564 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 CCDC82Q8N4S0 544 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 SMRP1Q8NCR6 262 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 POF1BQ8WVV4 589 aa21.76■■□□□ 1.07
GGPS1-206ENST00000488594 FOSP01100 380 aaPredicted RBP21.75■■□□□ 1.07
GGPS1-206ENST00000488594 ATG2AQ2TAZ0 1938 aa21.75■■□□□ 1.07
GGPS1-206ENST00000488594 PAN2Q504Q3 1202 aaKnown RBP21.75■■□□□ 1.07
GGPS1-206ENST00000488594 EDAQ92838 391 aa21.75■■□□□ 1.07
GGPS1-206ENST00000488594 FSD2A1L4K1 749 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 SARSP49591 514 aaKnown RBP21.74■■□□□ 1.07
GGPS1-206ENST00000488594 UBE3AQ05086 875 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 CEP55Q53EZ4 464 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 ODR4Q5SWX8 454 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 PPP1R18Q6NYC8 613 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 MTHFD1LQ6UB35 978 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 SYNE3Q6ZMZ3 975 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 ADGRD2Q7Z7M1 963 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 SGMS1Q86VZ5 419 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 TRAPPC12Q8WVT3 735 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 TMX1Q9H3N1 280 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 AAASQ9NRG9 546 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 CLEC1BQ9P126 229 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 PCDHB7Q9Y5E2 793 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 SLC27A2O14975 620 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 ATG7O95352 703 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 NRIP1P48552 1158 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 BMP8AQ7Z5Y6 402 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 CYP2W1Q8TAV3 490 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
GGPS1-206ENST00000488594 LSG1Q9H089 658 aaKnown RBP21.74■■□□□ 1.07
GGPS1-206ENST00000488594 AGO4Q9HCK5 861 aaKnown RBP21.74■■□□□ 1.07
GGPS1-206ENST00000488594 RIC8AQ9NPQ8 531 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 C1orf112Q9NSG2 853 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 PCDHB12Q9Y5F1 795 aa21.74■■□□□ 1.07
GGPS1-206ENST00000488594 ARP10275 920 aa21.73■■□□□ 1.07
GGPS1-206ENST00000488594 NAPAP54920 295 aa21.73■■□□□ 1.07
GGPS1-206ENST00000488594 NFX1Q12986 1120 aaKnown RBP21.73■■□□□ 1.07
GGPS1-206ENST00000488594 PKN1Q16512 942 aa21.73■■□□□ 1.07
GGPS1-206ENST00000488594 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
GGPS1-206ENST00000488594 RAB11FIP4Q86YS3 637 aa21.73■■□□□ 1.07
GGPS1-206ENST00000488594 RBM28Q9NW13 759 aaKnown RBP21.73■■□□□ 1.07
GGPS1-206ENST00000488594 IGKV6D-21A0A0A0MT36 114 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 hCG_1984214I3L0E3 225 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 MEIS1O00470 390 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 HBP1O60381 514 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 KLRC1P26715 233 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 ITGB3BPQ13352 177 aaPredicted RBP21.72■■□□□ 1.07
GGPS1-206ENST00000488594 AP3B2Q13367 1082 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 FAM160B1Q5W0V3 765 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 ZNF713Q8N859 430 aaPredicted RBP21.72■■□□□ 1.07
GGPS1-206ENST00000488594 ATP8B4Q8TF62 1192 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 GLT8D2Q9H1C3 349 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 TLE6Q9H808 572 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 ERVK-5Q9HDB9 667 aa21.72■■□□□ 1.07
GGPS1-206ENST00000488594 COL1A2P08123 1366 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 LOC730098B7Z3J9 87 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 RPS6KA5O75582 802 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 GATMP50440 423 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 ADCY7P51828 1080 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 NECTIN1Q15223 517 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 TMEM266Q2M3C6 531 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 CREB3L3Q68CJ9 461 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 PDE12Q6L8Q7 609 aaKnown RBP21.71■■□□□ 1.07
GGPS1-206ENST00000488594 SLC24A5Q71RS6 500 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 NIPA1Q7RTP0 329 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 RBM23Q86U06 439 aaKnown RBP21.71■■□□□ 1.07
GGPS1-206ENST00000488594 MICAL1Q8TDZ2 1067 aa21.71■■□□□ 1.07
GGPS1-206ENST00000488594 CDCA3Q99618 268 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms