RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 LCHNA4D1U4 455 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 GAS7O60861 476 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 AMHP03971 560 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 GHRP10912 638 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 XBP1P17861 261 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 MRPS6P82932 125 aaKnown RBP20.09■□□□□ 0.81
ITGB1-215ENST00000488494 ADGRE1Q14246 886 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 NONOQ15233 471 aaKnown RBP eCLIP20.09■□□□□ 0.811e-8■■■□□ 16.8
ITGB1-215ENST00000488494 C8orf34Q49A92 452 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 SWSAP1Q6NVH7 229 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 FAM117BQ6P1L5 589 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 KRT25Q7Z3Z0 450 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 CKAP2LQ8IYA6 745 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 MYOCDQ8IZQ8 938 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 IFIH1Q9BYX4 1025 aaKnown RBP20.09■□□□□ 0.81
ITGB1-215ENST00000488494 SAMM50Q9Y512 469 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 CDY2AQ9Y6F7 541 aa20.09■□□□□ 0.81
ITGB1-215ENST00000488494 COL4A4P53420 1690 aaPredicted RBP20.09■□□□□ 0.81
ITGB1-215ENST00000488494 IGSF9BQ9UPX0 1349 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 CHMP2AO43633 222 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 GJB5O95377 273 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 PSAPP07602 524 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 TAP1Q03518 808 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 LPIN1Q14693 890 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 INF2Q27J81 1249 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 LRCH2Q5VUJ6 765 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 SLC5A5Q92911 643 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 GJA10Q969M2 543 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 CERS4Q9HA82 394 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 PCDHA2Q9Y5H9 948 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 PCDHA10Q9Y5I2 948 aa20.08■□□□□ 0.81
ITGB1-215ENST00000488494 COL1A2P08123 1366 aa20.08■□□□□ 0.8
ITGB1-215ENST00000488494 CCDC194A0A1B0GVG4 234 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 HBP1O60381 514 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 RPLP2P05387 115 aaKnown RBP20.07■□□□□ 0.8
ITGB1-215ENST00000488494 TMEM62Q0P6H9 643 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 Q4G0T1 1027 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 MTHFD1LQ6UB35 978 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 SPRED2Q7Z698 418 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.07■□□□□ 0.8
ITGB1-215ENST00000488494 USP38Q8NB14 1042 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 NSUN7Q8NE18 718 aaKnown RBP20.07■□□□□ 0.8
ITGB1-215ENST00000488494 WASF1Q92558 559 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 APBB2Q92870 758 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 RIT2Q99578 217 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 TEKT3Q9BXF9 490 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 GABBR1Q9UBS5 961 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 REV3LO60673 3130 aa20.07■□□□□ 0.8
ITGB1-215ENST00000488494 EPOPA6NHQ4 379 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 ZBTB42B2RXF5 422 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 M0QZ92 97 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 FDPSP14324 419 aaKnown RBP20.06■□□□□ 0.8
ITGB1-215ENST00000488494 ATP4AP20648 1035 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 IGFBP4P22692 258 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 FBXO47Q5MNV8 452 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 TRMT1LQ7Z2T5 733 aaKnown RBP20.06■□□□□ 0.8
ITGB1-215ENST00000488494 OXER1Q8TDS5 423 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 ARNTL2Q8WYA1 636 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 RAD9AQ99638 391 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 UNC45AQ9H3U1 944 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 DDX25Q9UHL0 483 aaKnown RBP20.06■□□□□ 0.8
ITGB1-215ENST00000488494 MAFBQ9Y5Q3 323 aaPredicted RBP20.06■□□□□ 0.8
ITGB1-215ENST00000488494 TRPV2Q9Y5S1 764 aa20.06■□□□□ 0.8
ITGB1-215ENST00000488494 CYP3A7-CYP3A51PA0A087WV96 503 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 SLC37A4O43826 429 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 JAK2O60674 1132 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 CYP3A7P24462 503 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 KLRC1P26715 233 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 ST3GAL1Q11201 340 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 UGCGQ16739 394 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 LETM2Q2VYF4 491 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 IER5Q5VY09 327 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 MOXD1Q6UVY6 613 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 TSHZ1Q6ZSZ6 1077 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 ETNPPLQ8TBG4 499 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 MBOAT7Q96N66 472 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 DISC1Q9NRI5 854 aa20.05■□□□□ 0.8
ITGB1-215ENST00000488494 SMIM35A0A1B0GVV1 85 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.04■□□□□ 0.8
ITGB1-215ENST00000488494 RFXAPO00287 272 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 C22orf31O95567 290 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 JAK3P52333 1124 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 FOSBP53539 338 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 PRKCEQ02156 737 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 ZNF484Q5JVG2 852 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 PIK3AP1Q6ZUJ8 805 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 NEK8Q86SG6 692 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 BBXQ8WY36 941 aaPredicted RBP20.04■□□□□ 0.8
ITGB1-215ENST00000488494 PPM1EQ8WY54 764 aa20.04■□□□□ 0.8
ITGB1-215ENST00000488494 PSMD10O75832 226 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 OATP04181 439 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 SFNP31947 248 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 KRT2P35908 639 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 MICALL1Q8N3F8 863 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 FAM167AQ96KS9 214 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 AGO3Q9H9G7 860 aaKnown RBP20.03■□□□□ 0.8
ITGB1-215ENST00000488494 MTUS1Q9ULD2 1270 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 COL4A6Q14031 1691 aa20.03■□□□□ 0.8
ITGB1-215ENST00000488494 LINC01553A4QN01 128 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms