RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CCDC60Q8IWA6 550 aaPredicted RBP21.97■■□□□ 1.11
CD55-209ENST00000488171 CCDC148Q8NFR7 591 aa21.97■■□□□ 1.11
CD55-209ENST00000488171 ZNF577Q9BSK1 485 aa21.97■■□□□ 1.11
CD55-209ENST00000488171 LMCD1Q9NZU5 365 aa21.97■■□□□ 1.11
CD55-209ENST00000488171 EDIL3O43854 480 aa21.96■■□□□ 1.11
CD55-209ENST00000488171 RPLP2P05387 115 aaKnown RBP21.96■■□□□ 1.11
CD55-209ENST00000488171 CIITAP33076 1130 aa21.96■■□□□ 1.11
CD55-209ENST00000488171 TSHZ1Q6ZSZ6 1077 aa21.96■■□□□ 1.11
CD55-209ENST00000488171 BICD2Q8TD16 824 aa21.96■■□□□ 1.11
CD55-209ENST00000488171 YME1L1Q96TA2 773 aa21.96■■□□□ 1.11
CD55-209ENST00000488171 LARP6Q9BRS8 491 aaKnown RBP21.96■■□□□ 1.11
CD55-209ENST00000488171 UPF3BQ9BZI7 483 aaKnown RBP21.96■■□□□ 1.11
CD55-209ENST00000488171 BACH1O14867 736 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 IER5Q5VY09 327 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 FAM160B1Q5W0V3 765 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 MTHFD1LQ6UB35 978 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 FBXO22Q8NEZ5 403 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 LENG9Q96B70 501 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 ZNF274Q96GC6 653 aaPredicted RBP21.95■■□□□ 1.1
CD55-209ENST00000488171 AGO3Q9H9G7 860 aaKnown RBP21.95■■□□□ 1.1
CD55-209ENST00000488171 ZNF302Q9NR11 478 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 SH3GLB2Q9NR46 395 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 TBC1D22BQ9NU19 505 aa21.95■■□□□ 1.1
CD55-209ENST00000488171 SMIM35A0A1B0GVV1 85 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 ATP4AP20648 1035 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 TMEM62Q0P6H9 643 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 PRR16Q569H4 304 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 SWSAP1Q6NVH7 229 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 MIS18BP1Q6P0N0 1132 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 ADAMTS19Q8TE59 1207 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 ATP8B4Q8TF62 1192 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 TRPV2Q9Y5S1 764 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 SQORQ9Y6N5 450 aa21.94■■□□□ 1.1
CD55-209ENST00000488171 ENPP3O14638 875 aa21.93■■□□□ 1.1
CD55-209ENST00000488171 HBP1O60381 514 aa21.93■■□□□ 1.1
CD55-209ENST00000488171 CD52P31358 61 aa21.93■■□□□ 1.1
CD55-209ENST00000488171 EPC2Q52LR7 807 aa21.93■■□□□ 1.1
CD55-209ENST00000488171 ZNF746Q6NUN9 644 aaPredicted RBP21.93■■□□□ 1.1
CD55-209ENST00000488171 PDXDC2PQ6P474 469 aa21.93■■□□□ 1.1
CD55-209ENST00000488171 LINC01599Q8WXQ3 324 aa21.93■■□□□ 1.1
CD55-209ENST00000488171 ZBTB42B2RXF5 422 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 BMP1P13497 986 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 KLRC1P26715 233 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 KCNQ1P51787 676 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 SSRP1Q08945 709 aaKnown RBP21.92■■□□□ 1.1
CD55-209ENST00000488171 TRIM22Q8IYM9 498 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 SAMD11Q96NU1 681 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 CELF4Q9BZC1 486 aaKnown RBP21.92■■□□□ 1.1
CD55-209ENST00000488171 COG5Q9UP83 839 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 MAFBQ9Y5Q3 323 aaPredicted RBP21.92■■□□□ 1.1
CD55-209ENST00000488171 NLRC5Q86WI3 1866 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 COL1A2P08123 1366 aa21.92■■□□□ 1.1
CD55-209ENST00000488171 IGSF9BQ9UPX0 1349 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 KDM3AQ9Y4C1 1321 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 MUC3AQ02505 3323 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 LOXHD1Q8IVV2 1947 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 M0QZ92 97 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 TNFRSF10AO00220 468 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 NLRP5P59047 1200 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 STK3Q13188 491 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 AAK1Q2M2I8 961 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 SMAP1Q8IYB5 467 aaPredicted RBP21.91■■□□□ 1.1
CD55-209ENST00000488171 NME8Q8N427 588 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 IL17RAQ96F46 866 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 RC3H2Q9HBD1 1191 aaKnown RBP21.91■■□□□ 1.1
CD55-209ENST00000488171 PDRG1Q9NUG6 133 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 PPP4R2Q9NY27 417 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 RALGAPA2Q2PPJ7 1873 aa21.91■■□□□ 1.1
CD55-209ENST00000488171 CPLX1O14810 134 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 DEXIO95424 95 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 USP11P51784 963 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 KRT76Q01546 638 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 ZNF484Q5JVG2 852 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 RTN4RL1Q86UN2 441 aaPredicted RBP21.9■■□□□ 1.1
CD55-209ENST00000488171 TMEM192Q8IY95 271 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 HLA-CQ95604 372 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 PADI3Q9ULW8 664 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 PCDHA4Q9UN74 947 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 PCDHA10Q9Y5I2 948 aa21.9■■□□□ 1.1
CD55-209ENST00000488171 TTC3P53804 2025 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 H3BNC9 293 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 MSH4O15457 936 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 PSAPP07602 524 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 LINC00271P0C7V0 271 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 NPY5RQ15761 445 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 KIAA0319LQ8IZA0 1049 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 IL27Q8NEV9 243 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 AIFM3Q96NN9 605 aa21.89■■□□□ 1.1
CD55-209ENST00000488171 UHRF1Q96T88 793 aaPredicted RBP21.89■■□□□ 1.1
CD55-209ENST00000488171 M0R2N6 131 aa21.88■■□□□ 1.09
CD55-209ENST00000488171 C22orf31O95567 290 aa21.88■■□□□ 1.09
CD55-209ENST00000488171 CKAP2LQ8IYA6 745 aa21.88■■□□□ 1.09
CD55-209ENST00000488171 CRIPAKQ8N1N5 446 aa21.88■■□□□ 1.09
CD55-209ENST00000488171 TBCKQ8TEA7 893 aa21.88■■□□□ 1.09
CD55-209ENST00000488171 BBXQ8WY36 941 aaPredicted RBP21.88■■□□□ 1.09
CD55-209ENST00000488171 ZNF689Q96CS4 500 aaPredicted RBP21.88■■□□□ 1.09
CD55-209ENST00000488171 MRPL38Q96DV4 380 aaKnown RBP21.88■■□□□ 1.09
CD55-209ENST00000488171 FTHL17Q9BXU8 183 aa21.88■■□□□ 1.09
CD55-209ENST00000488171 GABBR1Q9UBS5 961 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms