RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TMEFF1Q8IYR6 380 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 EFHBQ8N7U6 833 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ASB15Q8WXK1 588 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ELF4Q99607 663 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 C11orf84Q9BUA3 381 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 FAM126AQ9BYI3 521 aaPredicted RBP5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 CD320Q9NPF0 282 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 DLL4Q9NR61 685 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 HSPBP1Q9NZL4 362 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 ARHGAP20Q9P2F6 1191 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 CROTQ9UKG9 612 aa5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 APOBEC2Q9Y235 224 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-217ENST00000488087 PRAMEF22A3QJZ6 481 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 FBXO21O94952 628 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 KRT1P04264 644 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 BPIP17213 487 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 PTGS1P23219 599 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 MC4RP32245 332 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 ID4P47928 161 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 GLRBP48167 497 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 SKIDA1Q1XH10 827 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 FBLN7Q53RD9 439 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 PHF19Q5T6S3 580 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 CREB3L3Q68CJ9 461 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 PROSER1Q86XN7 944 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 DDX42Q86XP3 938 aaKnown RBP eCLIP5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 TTLL6Q8N841 843 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 DTX3Q8N9I9 347 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 KYQ8NBH2 561 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 WDR48Q8TAF3 677 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 WDR66Q8TBY9 1149 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 IGDCC4Q8TDY8 1250 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 FNIP1Q8TF40 1166 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 SCYL1Q96KG9 808 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 WRNIP1Q96S55 665 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 EMC7Q9NPA0 242 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 PCDH12Q9NPG4 1184 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 UCKL1Q9NWZ5 548 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 WASF3Q9UPY6 502 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 ATP8A1Q9Y2Q0 1164 aa5.36□□□□□ -1.55
ECHDC1-217ENST00000488087 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 RASSF10A6NK89 507 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 NUAK1O60285 661 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 RAB11FIP3O75154 756 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 HMGB1P09429 215 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 FNTBP49356 437 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 TMPRSS15P98073 1019 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 AMPD3Q01432 767 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 ADAM9Q13443 819 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 STAT4Q14765 748 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 DDB1Q16531 1140 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 HDGFL2Q7Z4V5 671 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 ZZZ3Q8IYH5 903 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 E2F7Q96AV8 911 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 GPATCH3Q96I76 525 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 INCENPQ9NQS7 918 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 BTBD7Q9P203 1132 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 ZFP69BQ9UJL9 534 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 ASB1Q9Y576 335 aa5.35□□□□□ -1.55
ECHDC1-217ENST00000488087 GOLGA6L22H0YM25 854 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 TGM5O43548 720 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 CYP7B1O75881 506 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 EYA4O95677 639 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 ANAPC15P60006 121 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 IQSEC1Q6DN90 963 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 CIAPIN1Q6FI81 312 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 TTLL7Q6ZT98 887 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 NME9Q86XW9 330 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 LINC00482Q8N8I6 264 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 SLC5A5Q92911 643 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 PUS7Q96PZ0 661 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 TACO1Q9BSH4 297 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 IRF2BPLQ9H1B7 796 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 EPB41L4AQ9HCS5 686 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 GALNT8Q9NY28 637 aa5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 NOP58Q9Y2X3 529 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-217ENST00000488087 UBA6A0AVT1 1052 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 ULK1O75385 1050 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 POU3F3P20264 500 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 CD40P25942 277 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 LSP1P33241 339 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 THBS2P35442 1172 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 AFF3P51826 1226 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 IGBP1P78318 339 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 HTRA3P83110 453 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 SMAD3P84022 425 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 ADCY1Q08828 1119 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 EPHA7Q15375 998 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 SMAD2Q15796 467 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 BROXQ5VW32 411 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 RNF219Q5W0B1 726 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 ESRP1Q6NXG1 681 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 CILP2Q8IUL8 1156 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 TMEM151BQ8IW70 566 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 STPG3Q8N7X2 389 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 C7orf31Q8N865 590 aa5.33□□□□□ -1.56
ECHDC1-217ENST00000488087 CALML6Q8TD86 181 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms