RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
OPTN-212ENST00000487935 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
OPTN-212ENST00000487935 AGO4Q9HCK5 861 aaKnown RBP13.9□□□□□ -0.18
OPTN-212ENST00000487935 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
OPTN-212ENST00000487935 BRPF3Q9ULD4 1205 aa13.9□□□□□ -0.18
OPTN-212ENST00000487935 PCDHA2Q9Y5H9 948 aa13.9□□□□□ -0.18
OPTN-212ENST00000487935 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.18
OPTN-212ENST00000487935 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
OPTN-212ENST00000487935 BDP1A6H8Y1 2624 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 GOLGA8AA7E2F4 631 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 GOLGA8BA8MQT2 603 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 PI4K2BG5E9Z4 385 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 H3BQ06 376 aaPredicted RBP13.89□□□□□ -0.19
OPTN-212ENST00000487935 STXBP3O00186 592 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 NCK2O43639 380 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 GPR37L1O60883 481 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 DGKIO75912 1065 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 ATG7O95352 703 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 LINC00271P0C7V0 271 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 RPS6KB1P23443 525 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 CD52P31358 61 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 ZNF76P36508 570 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 FUT2Q10981 343 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 BARHL2Q9NY43 387 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 FAM50BQ9Y247 325 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 CYP46A1Q9Y6A2 500 aa13.89□□□□□ -0.19
OPTN-212ENST00000487935 TTC3P53804 2025 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 KLF18A0A0U1RQI7 1052 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 POTEB3A0JP26 581 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 MEIS1O00470 390 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 GRM6O15303 877 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 SSTR3P32745 418 aaPredicted RBP13.88□□□□□ -0.19
OPTN-212ENST00000487935 SREBF1P36956 1147 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 PLA2G5P39877 138 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 RBM25P49756 843 aaKnown RBP13.88□□□□□ -0.19
OPTN-212ENST00000487935 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
OPTN-212ENST00000487935 SLC26A2P50443 739 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 TMEM62Q0P6H9 643 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 PAK2Q13177 524 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 ITGB3BPQ13352 177 aaPredicted RBP13.88□□□□□ -0.19
OPTN-212ENST00000487935 COL19A1Q14993 1142 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 POTEBQ6S5H4 581 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 NIPA1Q7RTP0 329 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 NME8Q8N427 588 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 TRAPPC12Q8WVT3 735 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 LINC01599Q8WXQ3 324 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 TBC1D32Q96NH3 1257 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 PLVAPQ9BX97 442 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 CELF4Q9BZC1 486 aaKnown RBP13.88□□□□□ -0.19
OPTN-212ENST00000487935 TM6SF1Q9BZW5 370 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 ZSWIM6Q9HCJ5 1215 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 TMEM260Q9NX78 707 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 CLDND1Q9NY35 253 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 PADI3Q9ULW8 664 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 HCN4Q9Y3Q4 1203 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 IGSF9BQ9UPX0 1349 aa13.88□□□□□ -0.19
OPTN-212ENST00000487935 BACH1O14867 736 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 HBP1O60381 514 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 CDC27P30260 824 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 RCAN1P53805 252 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 FAM160B1Q5W0V3 765 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 MTHFD1LQ6UB35 978 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 RUFY3Q7L099 469 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
OPTN-212ENST00000487935 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
OPTN-212ENST00000487935 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
OPTN-212ENST00000487935 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
OPTN-212ENST00000487935 LOXHD1Q8IVV2 1947 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
OPTN-212ENST00000487935 ATG2AQ2TAZ0 1938 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 IGKV6D-21A0A0A0MT36 114 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 DDX39AO00148 427 aaKnown RBP13.86□□□□□ -0.19
OPTN-212ENST00000487935 MMP1P03956 469 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 KLRC1P26715 233 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 KRT76Q01546 638 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 NAALADL2Q58DX5 795 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 JAKMIP3Q5VZ66 844 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 Q6ZUG5 572 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 PLA2G4DQ86XP0 818 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 P2RX5Q93086 422 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 LRFN2Q9ULH4 789 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
OPTN-212ENST00000487935 MRPL42Q9Y6G3 142 aaKnown RBP13.86□□□□□ -0.19
OPTN-212ENST00000487935 BRWD1Q9NSI6 2320 aa13.86□□□□□ -0.19
OPTN-212ENST00000487935 CCDC196A0A1B0GTZ2 297 aa13.85□□□□□ -0.19
OPTN-212ENST00000487935 CCNE2O96020 404 aa13.85□□□□□ -0.19
OPTN-212ENST00000487935 CYP3A4P08684 503 aa13.85□□□□□ -0.19
OPTN-212ENST00000487935 SCG2P13521 617 aa13.85□□□□□ -0.19
OPTN-212ENST00000487935 ALADP13716 330 aa13.85□□□□□ -0.19
OPTN-212ENST00000487935 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
OPTN-212ENST00000487935 METAP2P50579 478 aaKnown RBP eCLIP13.85□□□□□ -0.19
OPTN-212ENST00000487935 HYAL1Q12794 435 aa13.85□□□□□ -0.19
OPTN-212ENST00000487935 NFX1Q12986 1120 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms