RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 FILIP1Q7Z7B0 1213 aa4.88□□□□□ -1.63
SENP6-210ENST00000487548 CFHR4Q92496 578 aa4.88□□□□□ -1.63
SENP6-210ENST00000487548 ZDHHC5Q9C0B5 715 aa4.88□□□□□ -1.63
SENP6-210ENST00000487548 CCSER2Q9H7U1 834 aa4.88□□□□□ -1.63
SENP6-210ENST00000487548 IPPKQ9H8X2 491 aa4.88□□□□□ -1.63
SENP6-210ENST00000487548 HECAQ9UBI9 543 aaPredicted RBP4.88□□□□□ -1.63
SENP6-210ENST00000487548 GIT1Q9Y2X7 761 aa4.88□□□□□ -1.63
SENP6-210ENST00000487548 IL13RA1P78552 427 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 PCOLCEQ15113 449 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 USP30Q70CQ3 517 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 GPR135Q8IZ08 494 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 RTKN2Q8IZC4 609 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 ST7Q9NRC1 585 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 CEP72Q9P209 647 aa4.87□□□□□ -1.63
SENP6-210ENST00000487548 FAM47E-STBD1D6RA91 191 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 PTPN1P18031 435 aaKnown RBP4.86□□□□□ -1.63
SENP6-210ENST00000487548 ATF4P18848 351 aaPredicted RBP4.86□□□□□ -1.63
SENP6-210ENST00000487548 MC4RP32245 332 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 ETFBP38117 255 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 IL12RB1P42701 662 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 MRE11P49959 708 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 MEOX1P50221 254 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 EPHA5P54756 1037 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 HNRNPA0Q13151 305 aaKnown RBP4.86□□□□□ -1.63
SENP6-210ENST00000487548 TMCO4Q5TGY1 634 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 RSPO2Q6UXX9 243 aaPredicted RBP4.86□□□□□ -1.63
SENP6-210ENST00000487548 SH3RF2Q8TEC5 729 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 DCAF4Q8WV16 495 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 PARPBPQ9NWS1 579 aa4.86□□□□□ -1.63
SENP6-210ENST00000487548 TCRBV5S4A2TA0A5A2 114 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 PRAMEF25A6NGN4 478 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 CAPNS1P04632 268 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 KRT15P19012 456 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 KRT4P19013 534 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 GPR85P60893 370 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 NFYCQ13952 458 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 RRP1BQ14684 758 aaKnown RBP4.85□□□□□ -1.63
SENP6-210ENST00000487548 NTRK3Q16288 839 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 HABP4Q5JVS0 413 aaKnown RBP4.85□□□□□ -1.63
SENP6-210ENST00000487548 EP400NLQ6ZTU2 488 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 IFNL3Q8IZI9 196 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 THEMISQ8N1K5 641 aaPredicted RBP4.85□□□□□ -1.63
SENP6-210ENST00000487548 SHCBP1Q8NEM2 672 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 WDR48Q8TAF3 677 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 ALG1Q9BT22 464 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 CAPN10Q9HC96 672 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 INCENPQ9NQS7 918 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 PRKAG3Q9UGI9 489 aa4.85□□□□□ -1.63
SENP6-210ENST00000487548 KCNK3O14649 394 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 PTGS1P23219 599 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 STAT3P40763 770 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 STAT5BP51692 787 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 HSP90AA2PQ14568 343 aaPredicted RBP4.84□□□□□ -1.63
SENP6-210ENST00000487548 SPTY2D1Q68D10 685 aaPredicted RBP4.84□□□□□ -1.63
SENP6-210ENST00000487548 PCSK4Q6UW60 755 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 LRSAM1Q6UWE0 723 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 ARHGAP36Q6ZRI8 547 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 PTRH1Q86Y79 214 aaKnown RBP4.84□□□□□ -1.63
SENP6-210ENST00000487548 TMPRSS6Q8IU80 811 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 TGIF2Q9GZN2 237 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 OR10A2Q9H208 303 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
SENP6-210ENST00000487548 AURKAIP1Q9NWT8 199 aaPredicted RBP4.84□□□□□ -1.63
SENP6-210ENST00000487548 CD83Q01151 205 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 LAIR1Q6GTX8 287 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.83□□□□□ -1.64
SENP6-210ENST00000487548 VOPP1Q96AW1 172 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 AARSD1Q9BTE6 412 aaKnown RBP4.83□□□□□ -1.64
SENP6-210ENST00000487548 EPN3Q9H201 632 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 ZNF703Q9H7S9 590 aaPredicted RBP4.83□□□□□ -1.64
SENP6-210ENST00000487548 NRDE2Q9H7Z3 1164 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 AGO3Q9H9G7 860 aaKnown RBP4.83□□□□□ -1.64
SENP6-210ENST00000487548 CATSPERZQ9NTU4 200 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 UCKL1Q9NWZ5 548 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 SRPK3Q9UPE1 567 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 TRAF6Q9Y4K3 522 aa4.83□□□□□ -1.64
SENP6-210ENST00000487548 ASXL2Q76L83 1435 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 CYP27B1O15528 508 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 SLC26A4O43511 780 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 PABPC1P11940 636 aaKnown RBP4.82□□□□□ -1.64
SENP6-210ENST00000487548 VAMP1P23763 118 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 GJA4P35212 333 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
SENP6-210ENST00000487548 ACAP1Q15027 740 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 YOD1Q5VVQ6 348 aaPredicted RBP4.82□□□□□ -1.64
SENP6-210ENST00000487548 NSMFQ6X4W1 530 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 Q6ZPA2 131 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 ADGRE4PQ86SQ3 457 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 RPUSD2Q8IZ73 545 aaKnown RBP4.82□□□□□ -1.64
SENP6-210ENST00000487548 OSBP2Q969R2 916 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 NAF1Q96HR8 494 aaKnown RBP4.82□□□□□ -1.64
SENP6-210ENST00000487548 PRRX2Q99811 253 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 PDGFDQ9GZP0 370 aaPredicted RBP4.82□□□□□ -1.64
SENP6-210ENST00000487548 NELFAQ9H3P2 528 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 GALNT8Q9NY28 637 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 FBXO10Q9UK96 956 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 SH3BP1Q9Y3L3 701 aa4.82□□□□□ -1.64
SENP6-210ENST00000487548 R3HCC1Q9Y3T6 440 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms