RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 GTF3C6Q969F1 213 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 RIT2Q99578 217 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 RAD9AQ99638 391 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 IFIH1Q9BYX4 1025 aaKnown RBP12.97□□□□□ -0.33
SPEN-205ENST00000487496 CERS4Q9HA82 394 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 GJB4Q9NTQ9 266 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 PCDHA2Q9Y5H9 948 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 PCDHA10Q9Y5I2 948 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 MAFBQ9Y5Q3 323 aaPredicted RBP12.97□□□□□ -0.33
SPEN-205ENST00000487496 MYO9BQ13459 2157 aa12.97□□□□□ -0.33
SPEN-205ENST00000487496 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 LARGE1O95461 756 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 TDP2O95551 362 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 PSAPP07602 524 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 GHRP10912 638 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 FDPSP14324 419 aaKnown RBP12.96□□□□□ -0.33
SPEN-205ENST00000487496 XBP1P17861 261 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 MRPS6P82932 125 aaKnown RBP12.96□□□□□ -0.33
SPEN-205ENST00000487496 LPIN1Q14693 890 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPEN-205ENST00000487496 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 MTHFD1LQ6UB35 978 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 MYOCDQ8IZQ8 938 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 APBB2Q92870 758 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 GJA10Q969M2 543 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 ORC3Q9UBD5 711 aaPredicted RBP12.96□□□□□ -0.33
SPEN-205ENST00000487496 TCEAL9Q9UHQ7 104 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 SAMM50Q9Y512 469 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 CDY2AQ9Y6F7 541 aa12.96□□□□□ -0.33
SPEN-205ENST00000487496 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.95□□□□□ -0.34
SPEN-205ENST00000487496 WDR64B1ANS9 1081 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 ZBTB42B2RXF5 422 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 IGFBP4P22692 258 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 KLRC1P26715 233 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 TMEM62Q0P6H9 643 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 INF2Q27J81 1249 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 ZNF484Q5JVG2 852 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 LRCH2Q5VUJ6 765 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 IER5Q5VY09 327 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 MOXD1Q6UVY6 613 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
SPEN-205ENST00000487496 CKAP2LQ8IYA6 745 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 USP38Q8NB14 1042 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
SPEN-205ENST00000487496 WASF1Q92558 559 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 MBOAT7Q96N66 472 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 DISC1Q9NRI5 854 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 GABBR1Q9UBS5 961 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
SPEN-205ENST00000487496 COL1A2P08123 1366 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 CCDC194A0A1B0GVG4 234 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 EPOPA6NHQ4 379 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 RFXAPO00287 272 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 GAS7O60861 476 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 PSMD10O75832 226 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 HTRA4P83105 476 aaPredicted RBP12.94□□□□□ -0.34
SPEN-205ENST00000487496 NME8Q8N427 588 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
SPEN-205ENST00000487496 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 ARNTL2Q8WYA1 636 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 TEKT3Q9BXF9 490 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 UNC45AQ9H3U1 944 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 AGO3Q9H9G7 860 aaKnown RBP12.94□□□□□ -0.34
SPEN-205ENST00000487496 DDX25Q9UHL0 483 aaKnown RBP12.94□□□□□ -0.34
SPEN-205ENST00000487496 INSL6Q9Y581 213 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 TRPV2Q9Y5S1 764 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 SQORQ9Y6N5 450 aa12.94□□□□□ -0.34
SPEN-205ENST00000487496 IGSF9BQ9UPX0 1349 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 M0QZ92 97 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 CHMP2AO43633 222 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 ZNF862O60290 1169 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 JAK2O60674 1132 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 SFNP31947 248 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 JAK3P52333 1124 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 ST3GAL1Q11201 340 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 LETM2Q2VYF4 491 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 B3GNT9Q6UX72 402 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 TSHZ1Q6ZSZ6 1077 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 TRMT1LQ7Z2T5 733 aaKnown RBP12.93□□□□□ -0.34
SPEN-205ENST00000487496 KIAA0319LQ8IZA0 1049 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 ETNPPLQ8TBG4 499 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 CELF4Q9BZC1 486 aaKnown RBP12.93□□□□□ -0.34
SPEN-205ENST00000487496 CHD9Q3L8U1 2897 aa12.93□□□□□ -0.34
SPEN-205ENST00000487496 KDM3AQ9Y4C1 1321 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 ENPP3O14638 875 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 SLC37A4O43826 429 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 UPP2O95045 317 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 C22orf31O95567 290 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 POU3F3P20264 500 aaPredicted RBP12.92□□□□□ -0.34
SPEN-205ENST00000487496 CD52P31358 61 aa12.92□□□□□ -0.34
SPEN-205ENST00000487496 CCDC85BQ15834 202 aaPredicted RBP12.92□□□□□ -0.34
SPEN-205ENST00000487496 UGCGQ16739 394 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms