RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 ZNF302Q9NR11 478 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 TRPV2Q9Y5S1 764 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 CYP46A1Q9Y6A2 500 aa14.14□□□□□ -0.15
SREBF1-215ENST00000487401 NID2Q14112 1375 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 IGKV6D-21A0A0A0MT36 114 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 SMIM35A0A1B0GVV1 85 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 EPB41L2O43491 1005 aaKnown RBP14.13□□□□□ -0.15
SREBF1-215ENST00000487401 KLRC1P26715 233 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 CD52P31358 61 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 KCNQ1P51787 676 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 NLRP5P59047 1200 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 PRR16Q569H4 304 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 ZNF484Q5JVG2 852 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 MTHFD1LQ6UB35 978 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 TRIM22Q8IYM9 498 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 MRPL38Q96DV4 380 aaKnown RBP14.13□□□□□ -0.15
SREBF1-215ENST00000487401 CELF4Q9BZC1 486 aaKnown RBP14.13□□□□□ -0.15
SREBF1-215ENST00000487401 NCOA5Q9HCD5 579 aaKnown RBP14.13□□□□□ -0.15
SREBF1-215ENST00000487401 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 SQORQ9Y6N5 450 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 KIAA1217Q5T5P2 1943 aa14.13□□□□□ -0.15
SREBF1-215ENST00000487401 SCN5AQ14524 2016 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 IGLV3-22A0A075B6J6 115 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 H3BNC9 293 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 CPLX1O14810 134 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 ADAMTS3O15072 1205 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 DHX15O43143 795 aaKnown RBP14.12□□□□□ -0.15
SREBF1-215ENST00000487401 PSAPP07602 524 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 EVCP57679 992 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 KRT76Q01546 638 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 SSRP1Q08945 709 aaKnown RBP14.12□□□□□ -0.15
SREBF1-215ENST00000487401 PAK2Q13177 524 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 NTRK3Q16288 839 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 ZNF746Q6NUN9 644 aaPredicted RBP14.12□□□□□ -0.15
SREBF1-215ENST00000487401 CCDC60Q8IWA6 550 aaPredicted RBP14.12□□□□□ -0.15
SREBF1-215ENST00000487401 RASGRP4Q8TDF6 673 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 CRYGNQ8WXF5 182 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 FTHL17Q9BXU8 183 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 AGO3Q9H9G7 860 aaKnown RBP14.12□□□□□ -0.15
SREBF1-215ENST00000487401 SH3GLB2Q9NR46 395 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 VPS54Q9P1Q0 977 aa14.12□□□□□ -0.15
SREBF1-215ENST00000487401 CIITAP33076 1130 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 CTNNB1P35222 781 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 BTG3Q14201 252 aaPredicted RBP14.11□□□□□ -0.15
SREBF1-215ENST00000487401 CPLX2Q6PUV4 134 aaKnown RBP14.11□□□□□ -0.15
SREBF1-215ENST00000487401 SMAP1Q8IYB5 467 aaPredicted RBP14.11□□□□□ -0.15
SREBF1-215ENST00000487401 NECAB3Q96P71 396 aaPredicted RBP14.11□□□□□ -0.15
SREBF1-215ENST00000487401 TM6SF1Q9BZW5 370 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 TANC1Q9C0D5 1861 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 PADI3Q9ULW8 664 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 GINS2Q9Y248 185 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 RWDD3Q9Y3V2 267 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 SAMM50Q9Y512 469 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 PCDHA10Q9Y5I2 948 aa14.11□□□□□ -0.15
SREBF1-215ENST00000487401 MYH6P13533 1939 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 RB1P06400 928 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 STAG3L1P0CL83 205 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 BMPR1AP36894 532 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 USP11P51784 963 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 TOB2Q14106 344 aaPredicted RBP14.1□□□□□ -0.15
SREBF1-215ENST00000487401 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 TRMT1LQ7Z2T5 733 aaKnown RBP14.1□□□□□ -0.15
SREBF1-215ENST00000487401 KIAA0319LQ8IZA0 1049 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 BANK1Q8NDB2 785 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 ZNF274Q96GC6 653 aaPredicted RBP14.1□□□□□ -0.15
SREBF1-215ENST00000487401 C22orf23Q9BZE7 217 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 UBE2ZQ9H832 354 aaPredicted RBP14.1□□□□□ -0.15
SREBF1-215ENST00000487401 PDRG1Q9NUG6 133 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 GABBR1Q9UBS5 961 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 LRFN2Q9ULH4 789 aa14.1□□□□□ -0.15
SREBF1-215ENST00000487401 COL1A2P08123 1366 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 WDR64B1ANS9 1081 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 ATP4AP20648 1035 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 IBSPP21815 317 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 NFX1Q12986 1120 aaKnown RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 ODR4Q5SWX8 454 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 FAM43BQ6ZT52 329 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 RTN4RL1Q86UN2 441 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 NPAS4Q8IUM7 802 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 METTL13Q8N6R0 699 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 BBXQ8WY36 941 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 LARP6Q9BRS8 491 aaKnown RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 C11orf84Q9BUA3 381 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 UPF3BQ9BZI7 483 aaKnown RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 NRBP2Q9NSY0 501 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 CEP131Q9UPN4 1083 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 MAFBQ9Y5Q3 323 aaPredicted RBP14.09□□□□□ -0.15
SREBF1-215ENST00000487401 TTC28Q96AY4 2481 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 ADGRA3Q8IWK6 1321 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 IGSF9BQ9UPX0 1349 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 KDM3AQ9Y4C1 1321 aa14.09□□□□□ -0.15
SREBF1-215ENST00000487401 XIRP2A4UGR9 3374 aa14.08□□□□□ -0.15
SREBF1-215ENST00000487401 TET1Q8NFU7 2136 aa14.08□□□□□ -0.16
SREBF1-215ENST00000487401 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.08□□□□□ -0.16
SREBF1-215ENST00000487401 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
SREBF1-215ENST00000487401 DGKIO75912 1065 aa14.08□□□□□ -0.16
SREBF1-215ENST00000487401 DEXIO95424 95 aa14.08□□□□□ -0.16
SREBF1-215ENST00000487401 KCNA5P22460 613 aa14.08□□□□□ -0.16
SREBF1-215ENST00000487401 STK3Q13188 491 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms