RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 MFSD14AQ96MC6 490 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 AZI2Q9H6S1 392 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 CLEC1BQ9P126 229 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 SLC9A2Q9UBY0 812 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 PCDHA2Q9Y5H9 948 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 IGSF9BQ9UPX0 1349 aa22.27■■□□□ 1.16
SMPDL3A-202ENST00000487215 STAG3L1P0CL83 205 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 SCG2P13521 617 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 GATMP50440 423 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 PAK2Q13177 524 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 PLCB4Q15147 1175 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 RAB11FIP4Q86YS3 637 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 EFHBQ8N7U6 833 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 TMEM87BQ96K49 555 aa22.26■■□□□ 1.15
SMPDL3A-202ENST00000487215 CALM1P0DP23 149 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 CALM2P0DP24 149 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 CALM3P0DP25 149 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 MCM5P33992 734 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 CCDC82Q8N4S0 544 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 SMRP1Q8NCR6 262 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 EDAQ92838 391 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 TNPO1Q92973 898 aaKnown RBP22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 MXRA8Q9BRK3 442 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 CELF4Q9BZC1 486 aaKnown RBP22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 TMX1Q9H3N1 280 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 KCNH7Q9NS40 1196 aa22.25■■□□□ 1.15
SMPDL3A-202ENST00000487215 LIFRP42702 1097 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 NRIP1P48552 1158 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 ACTR2P61160 394 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 COASYQ13057 564 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 TMTC3Q6ZXV5 915 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 PLPPR4Q7Z2D5 763 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 HEATR3Q7Z4Q2 680 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 CYP2W1Q8TAV3 490 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 PCDHGC5Q9Y5F6 944 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 NFASCO94856 1347 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 KDM3AQ9Y4C1 1321 aa22.24■■□□□ 1.15
SMPDL3A-202ENST00000487215 SMIM35A0A1B0GVV1 85 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 GLP2RO95838 553 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 STAT5BP51692 787 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 TMEM266Q2M3C6 531 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 RBM23Q86U06 439 aaKnown RBP22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 SDF4Q9BRK5 362 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 LRFN2Q9ULH4 789 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 BARX2Q9UMQ3 279 aaPredicted RBP22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 WDFY4Q6ZS81 3184 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 ZNF318Q5VUA4 2279 aa22.23■■□□□ 1.15
SMPDL3A-202ENST00000487215 LOC730098B7Z3J9 87 aa22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 ARP10275 920 aa22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 IBSPP21815 317 aaPredicted RBP22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 KRT76Q01546 638 aa22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 ITGB3BPQ13352 177 aaPredicted RBP22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 MTHFD1LQ6UB35 978 aa22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 SLC12A7Q9Y666 1083 aa22.22■■□□□ 1.15
SMPDL3A-202ENST00000487215 SARSP49591 514 aaKnown RBP22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 NFX1Q12986 1120 aaKnown RBP22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 BMP8AQ7Z5Y6 402 aa22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 NME8Q8N427 588 aa22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 FANCBQ8NB91 859 aa22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 PGBD1Q96JS3 809 aa22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 LRRC2Q9BYS8 371 aa22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 ERVK-5Q9HDB9 667 aa22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 USP15Q9Y4E8 981 aaPredicted RBP22.21■■□□□ 1.15
SMPDL3A-202ENST00000487215 MGEA5O60502 916 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 PPFIA3O75145 1194 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 WWC2Q6AWC2 1192 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 TYW1BQ6NUM6 668 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 TRIM67Q6ZTA4 783 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 MICU3Q86XE3 530 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 LSG1Q9H089 658 aaKnown RBP22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 AGO4Q9HCK5 861 aaKnown RBP22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 TECTAO75443 2155 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 PLXNA4Q9HCM2 1894 aa22.2■■□□□ 1.14
SMPDL3A-202ENST00000487215 TRIOO75962 3097 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 TMEM221A6NGB7 291 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 M0R296 226 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 SLC27A2O14975 620 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 ATG7O95352 703 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 KLRC1P26715 233 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 CBX2Q14781 532 aaPredicted RBP22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 CEP55Q53EZ4 464 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 PRSS33Q8NF86 280 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 ANO3Q9BYT9 981 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 TLE6Q9H808 572 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 GINS2Q9Y248 185 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 NOC2LQ9Y3T9 749 aaKnown RBP22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 PCDHB7Q9Y5E2 793 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 CNTNAP5Q8WYK1 1306 aa22.19■■□□□ 1.14
SMPDL3A-202ENST00000487215 LOXHD1Q8IVV2 1947 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 IGKV6D-21A0A0A0MT36 114 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 PER2O15055 1255 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 CCNE2O96020 404 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 SLC26A2P50443 739 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 NAPAP54920 295 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 UBE3AQ05086 875 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 SPOUT1Q5T280 376 aaKnown RBP22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 SGMS1Q86VZ5 419 aa22.18■■□□□ 1.14
SMPDL3A-202ENST00000487215 MICAL1Q8TDZ2 1067 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms