RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 PCDHGA2Q9Y5H1 932 aa14.27□□□□□ -0.13
ATPAF1-205ENST00000487193 CDY2AQ9Y6F7 541 aa14.27□□□□□ -0.13
ATPAF1-205ENST00000487193 KAT6AQ92794 2004 aa14.27□□□□□ -0.13
ATPAF1-205ENST00000487193 ZZEF1O43149 2961 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 IFIT2P09913 472 aaKnown RBP14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 ADAM17P78536 824 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 RING1Q06587 406 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 LPAL2Q16609 132 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 PPP4R3BQ5MIZ7 849 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 PHLDB3Q6NSJ2 640 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 GPR152Q8TDT2 470 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 DNAJB3Q8WWF6 145 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 GPR20Q99678 358 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 FTHL17Q9BXU8 183 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 EPC1Q9H2F5 836 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 IGSF9Q9P2J2 1179 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 PNMA2Q9UL42 364 aa14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 GCN1Q92616 2671 aaKnown RBP14.26□□□□□ -0.13
ATPAF1-205ENST00000487193 C2orf71A6NGG8 1288 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 TSPY2A6NKD2 308 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 GDF9O60383 454 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 TRIM27P14373 513 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 PLCB3Q01970 1234 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 UNQ6494/PRO21346Q6UXR6 183 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 MRPL43Q8N983 215 aaKnown RBP14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 CWH43Q9H720 699 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 FBXO4Q9UKT5 387 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 PADI3Q9ULW8 664 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 DENND4AQ7Z401 1863 aa14.25□□□□□ -0.13
ATPAF1-205ENST00000487193 LOXHD1Q8IVV2 1947 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 NOP56O00567 594 aaKnown RBP14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 TBC1D4O60343 1298 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 EPCAMP16422 314 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 UBA1P22314 1058 aaKnown RBP14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 PBX3P40426 434 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 KRT17Q04695 432 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 CCDC149Q6ZUS6 474 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 SLC44A3Q8N4M1 653 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 PJA1Q8NG27 643 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 USP26Q9BXU7 913 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 PXMP2Q9NR77 195 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 ZSCAN32Q9NX65 697 aa14.24□□□□□ -0.13
ATPAF1-205ENST00000487193 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 WDR19Q8NEZ3 1342 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 CXCL14O95715 111 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 SLC3A2P08195 630 aaKnown RBP14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 LAG3P18627 525 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 DCLRE1AQ6PJP8 1040 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 TSSK4Q6SA08 328 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 ZBTB44Q8NCP5 570 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 ARHGEF3Q9NR81 526 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 DZANK1Q9NVP4 752 aa14.23□□□□□ -0.13
ATPAF1-205ENST00000487193 MIA3Q5JRA6 1907 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 LILRB5O75023 590 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 SRFP11831 508 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 SARSP49591 514 aaKnown RBP14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 MRPS6P82932 125 aaKnown RBP14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 TMEM62Q0P6H9 643 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 PAK2Q13177 524 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 PTPN14Q15678 1187 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 IL31Q6EBC2 164 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 TAF2Q6P1X5 1199 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 CABP7Q86V35 215 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 KDF1Q8NAX2 398 aaPredicted RBP14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 DDX1Q92499 740 aaKnown RBP14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 OSBP2Q969R2 916 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 BCO2Q9BYV7 579 aa14.22□□□□□ -0.13
ATPAF1-205ENST00000487193 NRCAMQ92823 1304 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 SRRM3A6NNA2 597 aaPredicted RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 GBP2P32456 591 aaPredicted RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 KCNT2Q6UVM3 1135 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 GPR149Q86SP6 731 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 MCF2L2Q86YR7 1114 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 ZBTB10Q96DT7 871 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 FAM49AQ9H0Q0 323 aaPredicted RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 TMX1Q9H3N1 280 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 ZNF215Q9UL58 517 aaPredicted RBP14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 RAB23Q9ULC3 237 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 TELO2Q9Y4R8 837 aa14.21□□□□□ -0.13
ATPAF1-205ENST00000487193 PATL2C9JE40 543 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms