RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 FERMT3Q86UX7 667 aa17.49■□□□□ 0.39
SEMA4D-219ENST00000486935 DIS3L2Q8IYB7 885 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-219ENST00000486935 AGO4Q9HCK5 861 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-219ENST00000486935 BRMS1Q9HCU9 246 aa17.49■□□□□ 0.39
SEMA4D-219ENST00000486935 PCDHA4Q9UN74 947 aa17.49■□□□□ 0.39
SEMA4D-219ENST00000486935 MTCH2Q9Y6C9 303 aa17.49■□□□□ 0.39
SEMA4D-219ENST00000486935 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 ESYT2A0FGR8 921 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 MEIS1O00470 390 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 ADAMTS3O15072 1205 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 PDIA4P13667 645 aaKnown RBP17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 SREBF1P36956 1147 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 IGBP1P78318 339 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 MYOCDQ8IZQ8 938 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 FAM177A1Q8N128 213 aaPredicted RBP17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 PCYT2Q99447 389 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 ZMYND12Q9H0C1 365 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 ZDHHC9Q9Y397 364 aa17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
SEMA4D-219ENST00000486935 BTBD18B2RXH4 712 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 F13A1P00488 732 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 CHRNA1P02708 482 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 GNA11P29992 359 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 ACTR2P61160 394 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 ITGB3BPQ13352 177 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 SKIV2LQ15477 1246 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 NPY5RQ15761 445 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 TJAP1Q5JTD0 557 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 FAM26DQ5JW98 314 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 TAF2Q6P1X5 1199 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 RSPH3Q86UC2 560 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 BLIDQ8IZY5 108 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 ATXN2LQ8WWM7 1075 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 ZBTB10Q96DT7 871 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 UIMC1Q96RL1 719 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 THEGQ9P2T0 379 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 TUBE1Q9UJT0 475 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 MTUS1Q9ULD2 1270 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 INSL6Q9Y581 213 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 NFASCO94856 1347 aa17.47■□□□□ 0.39
SEMA4D-219ENST00000486935 DDX39AO00148 427 aaKnown RBP17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 UPP2O95045 317 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 INSRRP14616 1297 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 POU3F3P20264 500 aaPredicted RBP17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 STAT5BP51692 787 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 NR5A1Q13285 461 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 GRB10Q13322 594 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 MARCH8Q5T0T0 291 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 GALNT17Q6IS24 598 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 PLA2G4DQ86XP0 818 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 DAGLBQ8NCG7 672 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 BICD2Q8TD16 824 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 DNAJB3Q8WWF6 145 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 TRPC6Q9Y210 931 aa17.46■□□□□ 0.39
SEMA4D-219ENST00000486935 GBF1Q92538 1859 aa17.46■□□□□ 0.38
SEMA4D-219ENST00000486935 TET1Q8NFU7 2136 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 MBLAC1A4D2B0 266 aaPredicted RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 LINC01553A4QN01 128 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 RRN3P2A6NIE6 340 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 FAM86B1E9PN63 330 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 FAM86B2P0C5J1 330 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 MRPS5P82675 430 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 RESTQ13127 1097 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 MKRN4PQ13434 485 aaPredicted RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 NIPA1Q7RTP0 329 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 PLPPR4Q7Z2D5 763 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 REXO1Q8N1G1 1221 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 ASB2Q96Q27 587 aa17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 IFIH1Q9BYX4 1025 aaKnown RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
SEMA4D-219ENST00000486935 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 CYP3A4P08684 503 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 GHRP10912 638 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 ERVK-21P61565 698 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 PLCB4Q15147 1175 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 FOXD4L6Q3SYB3 417 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 MCTP2Q6DN12 878 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 FOXD4L3Q6VB84 417 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 APBB2Q92870 758 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 TOP1MTQ969P6 601 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 TGS1Q96RS0 853 aaKnown RBP17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 FAM49AQ9H0Q0 323 aaPredicted RBP17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 SUGCTQ9HAC7 445 aa17.44■□□□□ 0.38
SEMA4D-219ENST00000486935 BACH1O14867 736 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 LPXNO60711 386 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 ATG7O95352 703 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 CCNE2O96020 404 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 MGAT3Q09327 533 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 LPIN1Q14693 890 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 PIK3AP1Q6ZUJ8 805 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 NOSTRINQ8IVI9 506 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 GDPD5Q8WTR4 605 aa17.43■□□□□ 0.38
SEMA4D-219ENST00000486935 TRAPPC12Q8WVT3 735 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms