RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 PDXDC2PQ6P474 469 aa14.84□□□□□ -0.03
SF1-216ENST00000486867 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
SF1-216ENST00000486867 FAM167AQ96KS9 214 aa14.84□□□□□ -0.03
SF1-216ENST00000486867 EML1O00423 815 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 BAG4O95429 457 aaKnown RBP14.83□□□□□ -0.04
SF1-216ENST00000486867 CXCL10P02778 98 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 PDCP20941 246 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 CALCRLQ16602 461 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 UGCGQ16739 394 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 ZNF484Q5JVG2 852 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 TTC38Q5R3I4 469 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 TMEM240Q5SV17 173 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 LARP1BQ659C4 914 aaKnown RBP14.83□□□□□ -0.04
SF1-216ENST00000486867 MIER3Q7Z3K6 550 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 TMEM60Q9H2L4 133 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 GABBR1Q9UBS5 961 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 TUBE1Q9UJT0 475 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 PCDHA2Q9Y5H9 948 aa14.83□□□□□ -0.04
SF1-216ENST00000486867 CCL23P55773 120 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 MBTPS1Q14703 1052 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 EPHA7Q15375 998 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 SHHQ15465 462 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 TARBP2Q15633 366 aaKnown RBP14.82□□□□□ -0.04
SF1-216ENST00000486867 C9orf50Q5SZB4 431 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 ZNF618Q5T7W0 954 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 PSRC1Q6PGN9 363 aaPredicted RBP14.82□□□□□ -0.04
SF1-216ENST00000486867 LRRC8DQ7L1W4 858 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 RPUSD2Q8IZ73 545 aaKnown RBP14.82□□□□□ -0.04
SF1-216ENST00000486867 RETREG2Q8NC44 543 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 SCLYQ96I15 445 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 CEP89Q96ST8 783 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.82□□□□□ -0.043e-7■■■□□ 15.6
SF1-216ENST00000486867 NIFKQ9BYG3 293 aaKnown RBP14.82□□□□□ -0.04
SF1-216ENST00000486867 NOL7Q9UMY1 257 aaKnown RBP14.82□□□□□ -0.04
SF1-216ENST00000486867 PCDHA12Q9UN75 941 aa14.82□□□□□ -0.04
SF1-216ENST00000486867 CHMP2AO43633 222 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 OATP04181 439 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 MCM7P33993 719 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 PRKCEQ02156 737 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 RILPL1Q5EBL4 403 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 RUFY4Q6ZNE9 571 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 LINC01465Q8N7H1 131 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 HERVK_113Q902F9 699 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 TTC12Q9H892 705 aaPredicted RBP14.81□□□□□ -0.04
SF1-216ENST00000486867 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 SAMM50Q9Y512 469 aa14.81□□□□□ -0.04
SF1-216ENST00000486867 TTC3P53804 2025 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 SMIM35A0A1B0GVV1 85 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 H3BQV1 296 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 NBNO60934 754 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 LYPLA2O95372 231 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 C22orf31O95567 290 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 P4HBP07237 508 aaKnown RBP14.8□□□□□ -0.04
SF1-216ENST00000486867 OR52Z1P0C646 297 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 QARSP47897 775 aaKnown RBP14.8□□□□□ -0.04
SF1-216ENST00000486867 PSMC5P62195 406 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 MGAT3Q09327 533 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
SF1-216ENST00000486867 GNL2Q13823 731 aaKnown RBP14.8□□□□□ -0.04
SF1-216ENST00000486867 XKR3Q5GH77 459 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 MTHFD1LQ6UB35 978 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 ZNF365Q70YC5 407 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 BRAPQ7Z569 592 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 C4orf19Q8IY42 314 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 NEK9Q8TD19 979 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 TRAPPC12Q8WVT3 735 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 HSD17B14Q9BPX1 270 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.8□□□□□ -0.04
SF1-216ENST00000486867 CEP131Q9UPN4 1083 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 KDM3AQ9Y4C1 1321 aa14.8□□□□□ -0.04
SF1-216ENST00000486867 LAD1O00515 517 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 DKC1O60832 514 aaKnown RBP eCLIP14.79□□□□□ -0.04
SF1-216ENST00000486867 SYT1P21579 422 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 KLRC1P26715 233 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 THPOP40225 353 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 PRPHP41219 470 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 FXR1P51114 621 aaKnown RBP eCLIP14.79□□□□□ -0.04
SF1-216ENST00000486867 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
SF1-216ENST00000486867 MYO9BQ13459 2157 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 ZNF174Q15697 407 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 HSCBQ8IWL3 235 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 NRBP2Q9NSY0 501 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 WRAP73Q9P2S5 460 aaPredicted RBP14.79□□□□□ -0.04
SF1-216ENST00000486867 PPME1Q9Y570 386 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 PCDHB6Q9Y5E3 794 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 SQORQ9Y6N5 450 aa14.79□□□□□ -0.04
SF1-216ENST00000486867 CHD9Q3L8U1 2897 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 IGKV6-21A0A0C4DH24 114 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 RSPH10B2B2RC85 870 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 MAGEB2O15479 319 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 FGBP02675 491 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 CHRNA1P02708 482 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 RSPH10BP0C881 870 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 ACRP10323 421 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 TXKP42681 527 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 NBR1Q14596 966 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 MCTP1Q6DN14 999 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 GPR153Q6NV75 609 aa14.78□□□□□ -0.04
SF1-216ENST00000486867 FAM43BQ6ZT52 329 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms