RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
CCDC171-208ENST00000486641 BAZ2AQ9UIF9 1905 aaKnown RBP11.59□□□□□ -0.55
CCDC171-208ENST00000486641 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 FGRP09769 529 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PAPOLAP51003 745 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 DYNLL1P63167 89 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PTK2Q05397 1052 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 ASIC2Q16515 512 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 UBAP2Q5T6F2 1119 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 KIF6Q6ZMV9 814 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 UNC13DQ70J99 1090 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 SV2BQ7L1I2 683 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PABPC3Q9H361 631 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 ZDHHC18Q9NUE0 388 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 KCPQ6ZWJ8 1503 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PLCH1Q4KWH8 1693 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 GOLGA6L10A0A0M3HER8 536 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 CCDC169A6NNP5 214 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 OR52Z1P0C646 297 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 ADRA2BP18089 450 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 ATP11AP98196 1134 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 SLC29A2Q14542 456 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 SEPT2Q15019 361 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 CNGA2Q16280 664 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 CWF19L1Q69YN2 538 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 TRIM68Q6AZZ1 485 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 ASRGL1Q7L266 308 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 ZNF571Q7Z3V5 609 aaPredicted RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PEX26Q7Z412 305 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 DAAM2Q86T65 1068 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 TEX9Q8N6V9 391 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 MOV10L1Q9BXT6 1211 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
CCDC171-208ENST00000486641 BLOC1S4Q9NUP1 217 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
CCDC171-208ENST00000486641 PVALEFA0A1B0GWK0 134 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 SPDYE3A6NKU9 549 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 MPHOSPH10O00566 681 aaKnown RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 SMIM24O75264 130 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 MYBL1P10243 752 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 GNAT1P11488 350 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 PDE6CP51160 858 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 PLS1Q14651 629 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 DENND2CQ68D51 928 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 ANO7Q6IWH7 933 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 FITM2Q8N6M3 262 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 NEK9Q8TD19 979 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 NKX1-2Q9UD57 310 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 TRAF5O00463 557 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 MAP3K13O43283 966 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 CCNT1O60563 726 aaKnown RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 AGTP01019 485 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 FERP16591 822 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 KIF5BP33176 963 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 COPB2P35606 906 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 KLRC3Q07444 240 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 GRB10Q13322 594 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 LETM2Q2VYF4 491 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 C10orf76Q5T2E6 689 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 DUPD1Q68J44 220 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 IRF2BP2Q7Z5L9 587 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-208ENST00000486641 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 TSG101Q99816 390 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 FGFR1OP2Q9NVK5 253 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 LRRC42Q9Y546 428 aa11.57□□□□□ -0.56
CCDC171-208ENST00000486641 TCP11X1B4DZS4 312 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 USP17L12C9JPN9 530 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 USP17L21D6R901 530 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 FGGP02679 453 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 GNAZP19086 355 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 SLCO1A2P46721 670 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 TUBP50607 506 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 PLTPP55058 493 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 LRRC14Q15048 493 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 SLC5A9Q2M3M2 681 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 CCDC38Q502W7 563 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 SLFN11Q7Z7L1 901 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 MFN1Q8IWA4 741 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 GBP7Q8N8V2 638 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-208ENST00000486641 EPS8L3Q8TE67 593 aaKnown RBP11.56□□□□□ -0.56
CCDC171-208ENST00000486641 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 IFT74Q96LB3 600 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 ERP44Q9BS26 406 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 CCDC113Q9H0I3 377 aa11.56□□□□□ -0.56
CCDC171-208ENST00000486641 GANQ9H2C0 597 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms