RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 LENG9Q96B70 501 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 GAS2L1Q99501 681 aaPredicted RBP12.48□□□□□ -0.41
SNX21-211ENST00000486336 OSBPL7Q9BZF2 842 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 CERS4Q9HA82 394 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
SNX21-211ENST00000486336 MBLAC1A4D2B0 266 aaPredicted RBP12.47□□□□□ -0.41
SNX21-211ENST00000486336 WDR64B1ANS9 1081 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 M0QZ92 97 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 MARCH6O60337 910 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 AMHP03971 560 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 CA3P07451 260 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 GHRP10912 638 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 FDPSP14324 419 aaKnown RBP12.47□□□□□ -0.41
SNX21-211ENST00000486336 IGFBP4P22692 258 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 KLRC1P26715 233 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 KRT2P35908 639 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 TRIM29Q14134 588 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 Q4G0T1 1027 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 PLEKHG4Q58EX7 1191 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 MTHFD1LQ6UB35 978 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNX21-211ENST00000486336 MIER3Q7Z3K6 550 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 CCDC83Q8IWF9 413 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 MYOCDQ8IZQ8 938 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 NSUN7Q8NE18 718 aaKnown RBP12.47□□□□□ -0.41
SNX21-211ENST00000486336 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
SNX21-211ENST00000486336 ATP8B4Q8TF62 1192 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 PPM1EQ8WY54 764 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 SLC5A5Q92911 643 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 RIT2Q99578 217 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 DISC1Q9NRI5 854 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
SNX21-211ENST00000486336 PCDHA2Q9Y5H9 948 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 CDY2AQ9Y6F7 541 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 MYO9BQ13459 2157 aa12.47□□□□□ -0.41
SNX21-211ENST00000486336 CYP3A7-CYP3A51PA0A087WV96 503 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
SNX21-211ENST00000486336 UPP2O95045 317 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 ATP4AP20648 1035 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 CYP3A7P24462 503 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 MRPS6P82932 125 aaKnown RBP12.46□□□□□ -0.41
SNX21-211ENST00000486336 ZNF484Q5JVG2 852 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 IER5Q5VY09 327 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 NEK8Q86SG6 692 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 IFIH1Q9BYX4 1025 aaKnown RBP12.46□□□□□ -0.41
SNX21-211ENST00000486336 UPF2Q9HAU5 1272 aaKnown RBP12.46□□□□□ -0.41
SNX21-211ENST00000486336 NRBP2Q9NSY0 501 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 GINS2Q9Y248 185 aa12.46□□□□□ -0.41
SNX21-211ENST00000486336 MAFBQ9Y5Q3 323 aaPredicted RBP12.46□□□□□ -0.41
SNX21-211ENST00000486336 GBF1Q92538 1859 aa12.46□□□□□ -0.42
SNX21-211ENST00000486336 SLC37A4O43826 429 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 SFNP31947 248 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 JAK3P52333 1124 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 GUCY1B3Q02153 619 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 MGAT3Q09327 533 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 NR5A1Q13285 461 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 LPIN1Q14693 890 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 MOXD1Q6UVY6 613 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 RPAINQ86UA6 219 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
SNX21-211ENST00000486336 APBB2Q92870 758 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 ZSCAN31Q96LW9 406 aaPredicted RBP12.45□□□□□ -0.42
SNX21-211ENST00000486336 PPP1R16BQ96T49 567 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 TRPV2Q9Y5S1 764 aa12.45□□□□□ -0.42
SNX21-211ENST00000486336 SMIM35A0A1B0GVV1 85 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 BTBD18B2RXH4 712 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 RFXAPO00287 272 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 PSMD10O75832 226 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 RPLP2P05387 115 aaKnown RBP12.44□□□□□ -0.42
SNX21-211ENST00000486336 IBSPP21815 317 aaPredicted RBP12.44□□□□□ -0.42
SNX21-211ENST00000486336 CD52P31358 61 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 CCDC85BQ15834 202 aaPredicted RBP12.44□□□□□ -0.42
SNX21-211ENST00000486336 EARS2Q5JPH6 523 aaKnown RBP12.44□□□□□ -0.42
SNX21-211ENST00000486336 FBXO47Q5MNV8 452 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 KRT40Q6A162 431 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 MICALL1Q8N3F8 863 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 NME8Q8N427 588 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 ARNTL2Q8WYA1 636 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 FAM167AQ96KS9 214 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 MBOAT7Q96N66 472 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 RAD9AQ99638 391 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 KIF2CQ99661 725 aa12.44□□□□□ -0.42
SNX21-211ENST00000486336 NAP1L4Q99733 375 aaKnown RBP12.44□□□□□ -0.42
SNX21-211ENST00000486336 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
SNX21-211ENST00000486336 COL1A2P08123 1366 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
SNX21-211ENST00000486336 LCHNA4D1U4 455 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 ARHGEF15O94989 841 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 GJB5O95377 273 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 BAG4O95429 457 aaKnown RBP12.43□□□□□ -0.42
SNX21-211ENST00000486336 MMP1P03956 469 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 OATP04181 439 aa12.43□□□□□ -0.42
SNX21-211ENST00000486336 GCFC2P16383 781 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms