RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 INSL6Q9Y581 213 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 MAFBQ9Y5Q3 323 aaPredicted RBP20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 CDY2AQ9Y6F7 541 aa20.86■□□□□ 0.93
PRPF40A-209ENST00000486100 SMIM35A0A1B0GVV1 85 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 MSH4O15457 936 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 PSAPP07602 524 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 GHRP10912 638 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 POU3F3P20264 500 aaPredicted RBP20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 ATP4AP20648 1035 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 KLRC1P26715 233 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 MRPS6P82932 125 aaKnown RBP20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 LPIN1Q14693 890 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 ZNF484Q5JVG2 852 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 FBXO47Q5MNV8 452 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 NME8Q8N427 588 aa20.85■□□□□ 0.93
PRPF40A-209ENST00000486100 STK36Q9NRP7 1315 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 EPOPA6NHQ4 379 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 SEC24BO95487 1268 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 XBP1P17861 261 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 CYP3A7P24462 503 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 HTRA4P83105 476 aaPredicted RBP20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 CCDC85BQ15834 202 aaPredicted RBP20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 Q4G0T1 1027 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 RIT2Q99578 217 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 KCNJ14Q9UNX9 436 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 SQORQ9Y6N5 450 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 A0A0C4DFX4 3053 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 GBF1Q92538 1859 aa20.84■□□□□ 0.93
PRPF40A-209ENST00000486100 LINC01553A4QN01 128 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 M0QZ92 97 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 CTDNEP1O95476 244 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 NONOQ15233 471 aaKnown RBP eCLIP20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 TSHZ1Q6ZSZ6 1077 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 SPRED2Q7Z698 418 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 CKAP2LQ8IYA6 745 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 BBXQ8WY36 941 aaPredicted RBP20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 GABBR1Q9UBS5 961 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 SAMM50Q9Y512 469 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 TRPV2Q9Y5S1 764 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 MTCH2Q9Y6C9 303 aa20.83■□□□□ 0.93
PRPF40A-209ENST00000486100 COL1A2P08123 1366 aa20.83■□□□□ 0.92
PRPF40A-209ENST00000486100 CHD7Q9P2D1 2997 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 EYSQ5T1H1 3165 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 WDR64B1ANS9 1081 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 GTPBP6O43824 516 aaPredicted RBP20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 NEK4P51957 841 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 ERVK-21P61565 698 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 ME3Q16798 604 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 MOXD1Q6UVY6 613 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 KRT25Q7Z3Z0 450 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 MBOAT7Q96N66 472 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 TGS1Q96RS0 853 aaKnown RBP20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 CELF4Q9BZC1 486 aaKnown RBP20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 DISC1Q9NRI5 854 aa20.82■□□□□ 0.92
PRPF40A-209ENST00000486100 ZBTB42B2RXF5 422 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 ENPP3O14638 875 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 GAS7O60861 476 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 UPP2O95045 317 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 TMEM62Q0P6H9 643 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 LRCH2Q5VUJ6 765 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 KIAA0319LQ8IZA0 1049 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 SP7Q8TDD2 431 aaPredicted RBP20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 WASF1Q92558 559 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 TEKT3Q9BXF9 490 aa20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 AGO3Q9H9G7 860 aaKnown RBP20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 ORC3Q9UBD5 711 aaPredicted RBP20.81■□□□□ 0.92
PRPF40A-209ENST00000486100 KDM3AQ9Y4C1 1321 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 DTNBO60941 627 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 PSMD10O75832 226 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 TDP2O95551 362 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 SFNP31947 248 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 GRB10Q13322 594 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 INF2Q27J81 1249 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 NECAB1Q8N987 351 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 YME1L1Q96TA2 773 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 PRDM6Q9NQX0 595 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 CEP131Q9UPN4 1083 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 KAT6AQ92794 2004 aa20.8■□□□□ 0.92
PRPF40A-209ENST00000486100 CCDC194A0A1B0GVG4 234 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 LPXNO60711 386 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 FDPSP14324 419 aaKnown RBP20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 CD52P31358 61 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 JAK3P52333 1124 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 TRMT1LQ7Z2T5 733 aaKnown RBP20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 MICALL1Q8N3F8 863 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 GTF3C6Q969F1 213 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 GJA10Q969M2 543 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 FAM167AQ96KS9 214 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 COL25A1Q9BXS0 654 aaPredicted RBP20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 UNC45AQ9H3U1 944 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 SUGCTQ9HAC7 445 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 NRBP2Q9NSY0 501 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 GJB4Q9NTQ9 266 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 MTUS1Q9ULD2 1270 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 MYO9BQ13459 2157 aa20.79■□□□□ 0.92
PRPF40A-209ENST00000486100 UNC80Q8N2C7 3258 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms