RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 CELF3Q5SZQ8 465 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
COL9A1-207ENST00000486080 MIS18BP1Q6P0N0 1132 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 METTL7BQ6UX53 244 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 C1orf186Q6ZWK4 172 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 MLXIPQ9HAP2 919 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 SLC39A2Q9NP94 309 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 SLC5A4Q9NY91 659 aa16.05■□□□□ 0.16
COL9A1-207ENST00000486080 MYH11P35749 1972 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 ARHGEF35A5YM69 484 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 BACH1O14867 736 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 CYP2B6P20813 491 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 VEGFBP49765 207 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 STX17P56962 302 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 TTLL4Q14679 1199 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 CCL14Q16627 93 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
COL9A1-207ENST00000486080 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 KIAA0895Q8NCT3 520 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 GLIS3Q8NEA6 775 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
COL9A1-207ENST00000486080 CTNND2Q9UQB3 1225 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 ARID2Q68CP9 1835 aa16.04■□□□□ 0.16
COL9A1-207ENST00000486080 FRMD3A2A2Y4 597 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 IKBKBO14920 756 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 STBD1O95210 358 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 HOXC6P09630 235 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ERCC5P28715 1186 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ADCYAP1R1P41586 468 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 RARRES1P49788 294 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 MYL5Q02045 173 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ANO5Q75V66 913 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 DHX37Q8IY37 1157 aaKnown RBP16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ADSSL1Q8N142 457 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 IGKV6D-21A0A0A0MT36 114 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-207ENST00000486080 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
COL9A1-207ENST00000486080 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ATP4AP20648 1035 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 NPEPPSP55786 919 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 HSDL1Q3SXM5 330 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
COL9A1-207ENST00000486080 PADI6Q6TGC4 694 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 TRIM47Q96LD4 638 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 PCYT2Q99447 389 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 FGFBP2Q9BYJ0 223 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 ZNF302Q9NR11 478 aa16.03■□□□□ 0.16
COL9A1-207ENST00000486080 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 TCF7P36402 384 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 RGS2P41220 211 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 PSMC4P43686 418 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 LACTBP83111 547 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 CAP1Q01518 475 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 PRKCEQ02156 737 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 ACVR2BQ13705 512 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 LRRC41Q15345 812 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 CT47A1Q5JQC4 288 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 ENOX1Q8TC92 643 aaKnown RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 NELFBQ8WX92 580 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 SEPT1Q8WYJ6 367 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 SPATA33Q96N06 139 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 GPR20Q99678 358 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 ABHD16BQ9H3Z7 469 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 ANKEF1Q9NU02 776 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 FANCLQ9NW38 375 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 ZHX1Q9UKY1 873 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 PCDHA2Q9Y5H9 948 aa16.02■□□□□ 0.16
COL9A1-207ENST00000486080 MAFBQ9Y5Q3 323 aaPredicted RBP16.02■□□□□ 0.16
COL9A1-207ENST00000486080 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 SFI1A8K8P3 1242 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 TRPA1O75762 1119 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 ARHGAP1Q07960 439 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 SFR1Q86XK3 245 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 MSL3Q8N5Y2 521 aaKnown RBP16.01■□□□□ 0.15
COL9A1-207ENST00000486080 NOP56O00567 594 aaKnown RBP16.01■□□□□ 0.15
COL9A1-207ENST00000486080 CYP2C19P33261 490 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
COL9A1-207ENST00000486080 FCGRTP55899 365 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 PAK1Q13153 545 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 PSMD2Q13200 908 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 HSP90AA4PQ58FG1 418 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 MAEAQ7L5Y9 396 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 SOCS4Q8WXH5 440 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 APBA2Q99767 749 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 RNF186Q9NXI6 227 aa16.01■□□□□ 0.15
COL9A1-207ENST00000486080 KCND2Q9NZV8 630 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms