RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GTPBP6O43824 516 aaPredicted RBP12.64□□□□□ -0.39
SND1-212ENST00000485871 KLRC4O43908 158 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 LGR5O75473 907 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 EYA4O95677 639 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 ATP4AP20648 1035 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
SND1-212ENST00000485871 PSMC5P62195 406 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 CUL4BQ13620 913 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 SYT2Q8N9I0 419 aaPredicted RBP12.64□□□□□ -0.39
SND1-212ENST00000485871 SLC17A8Q8NDX2 589 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 RASSF8Q8NHQ8 419 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 AFAP1L1Q8TED9 768 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 C7orf25Q9BPX7 421 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 TRIM9Q9C026 710 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
SND1-212ENST00000485871 MAFBQ9Y5Q3 323 aaPredicted RBP12.64□□□□□ -0.39
SND1-212ENST00000485871 MKI67P46013 3256 aaKnown RBP12.63□□□□□ -0.39
SND1-212ENST00000485871 ZBTB39O15060 712 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 GH1P01241 217 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 MYL1P05976 194 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 PSAPP07602 524 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 HOXD8P13378 290 aaPredicted RBP12.63□□□□□ -0.39
SND1-212ENST00000485871 CYP11B2P19099 503 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 SP4Q02446 784 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 TRIM32Q13049 653 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 MAP3K21Q5TCX8 1036 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 MIS18BP1Q6P0N0 1132 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 TPH2Q8IWU9 490 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 DHX37Q8IY37 1157 aaKnown RBP12.63□□□□□ -0.39
SND1-212ENST00000485871 TRMT44Q8IYL2 757 aaKnown RBP12.63□□□□□ -0.39
SND1-212ENST00000485871 SEPT1Q8WYJ6 367 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 DNAJC19Q96DA6 116 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 PDLIM2Q96JY6 352 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 PTPN22Q9Y2R2 807 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 SAMM50Q9Y512 469 aa12.63□□□□□ -0.39
SND1-212ENST00000485871 EMSYQ7Z589 1322 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 BMP6P22004 513 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 HOXD10P28358 340 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 TCF7P36402 384 aaPredicted RBP12.62□□□□□ -0.39
SND1-212ENST00000485871 RARRES1P49788 294 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 PRMT2P55345 433 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 LAMC2Q13753 1193 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 SWSAP1Q6NVH7 229 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 PXYLP1Q8TE99 480 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 PIGOQ8TEQ8 1089 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 BLZF1Q9H2G9 400 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
SND1-212ENST00000485871 MAN1B1Q9UKM7 699 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 DNM3Q9UQ16 869 aa12.62□□□□□ -0.39
SND1-212ENST00000485871 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.61□□□□□ -0.39
SND1-212ENST00000485871 ELNP15502 786 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 NKX3-2P78367 333 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 TYRO3Q06418 890 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 CACNB2Q08289 660 aaPredicted RBP12.61□□□□□ -0.39
SND1-212ENST00000485871 EHHADHQ08426 723 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 MFSD14CQ5VZR4 134 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 C1orf186Q6ZWK4 172 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 ANO5Q75V66 913 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 ATP6V0A1Q93050 837 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 LENG1Q96BZ8 264 aaPredicted RBP12.61□□□□□ -0.39
SND1-212ENST00000485871 ARMC5Q96C12 935 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 CCDC34Q96HJ3 373 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 CEP89Q96ST8 783 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 BHMT2Q9H2M3 363 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 ZNF302Q9NR11 478 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 ANKEF1Q9NU02 776 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
SND1-212ENST00000485871 Q9Y3F1 56 aa12.61□□□□□ -0.39
SND1-212ENST00000485871 KIAA0100Q14667 2235 aaKnown RBP12.61□□□□□ -0.39
SND1-212ENST00000485871 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 TMEM150BA6NC51 233 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 H0YGN5 161 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 ADCY3O60266 1144 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 DKC1O60832 514 aaKnown RBP eCLIP12.6□□□□□ -0.39
SND1-212ENST00000485871 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
SND1-212ENST00000485871 MMP3P08254 477 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 AKR1A1P14550 325 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 YWHABP31946 246 aaKnown RBP12.6□□□□□ -0.39
SND1-212ENST00000485871 AMPD3Q01432 767 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 PRKCEQ02156 737 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 MORC3Q14149 939 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 DHX8Q14562 1220 aaKnown RBP12.6□□□□□ -0.39
SND1-212ENST00000485871 KCNB1Q14721 858 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 RINT1Q6NUQ1 792 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 SASS6Q6UVJ0 657 aa12.6□□□□□ -0.39
SND1-212ENST00000485871 GPBP1Q86WP2 473 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms