RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 TRPV2Q9Y5S1 764 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 NLRC5Q86WI3 1866 aa19.51■□□□□ 0.71
SMC4-216ENST00000485645 IGKV6D-21A0A0A0MT36 114 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 SMIM35A0A1B0GVV1 85 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 PRPF3O43395 683 aaKnown RBP19.5■□□□□ 0.71
SMC4-216ENST00000485645 CCNE2O96020 404 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 RPS6KB1P23443 525 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 PSMA5P28066 241 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 AKAP17AQ02040 695 aaKnown RBP19.5■□□□□ 0.71
SMC4-216ENST00000485645 TMEM62Q0P6H9 643 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 TIGD5Q53EQ6 642 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 MTHFD1LQ6UB35 978 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 NME8Q8N427 588 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 FBXL16Q8N461 479 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 FTHL17Q9BXU8 183 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 RWDD3Q9Y3V2 267 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 TTC3P53804 2025 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 ADGRA3Q8IWK6 1321 aa19.5■□□□□ 0.71
SMC4-216ENST00000485645 NID2Q14112 1375 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 IPO5O00410 1097 aaKnown RBP19.49■□□□□ 0.71
SMC4-216ENST00000485645 HBP1O60381 514 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 REC8O95072 547 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 RB1P06400 928 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 GNA11P29992 359 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 CTNNB1P35222 781 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 PKN1Q16512 942 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 MIS18BP1Q6P0N0 1132 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 REXO1Q8N1G1 1221 aaKnown RBP19.49■□□□□ 0.71
SMC4-216ENST00000485645 BANK1Q8NDB2 785 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 CRYGNQ8WXF5 182 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 AGXT2Q9BYV1 514 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 CELF4Q9BZC1 486 aaKnown RBP19.49■□□□□ 0.71
SMC4-216ENST00000485645 ZNF302Q9NR11 478 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 RALGAPA2Q2PPJ7 1873 aa19.49■□□□□ 0.71
SMC4-216ENST00000485645 IGLV3-22A0A075B6J6 115 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 DHX15O43143 795 aaKnown RBP19.48■□□□□ 0.71
SMC4-216ENST00000485645 KCNA5P22460 613 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 KLRC1P26715 233 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 BMPR1AP36894 532 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 SETQ01105 290 aaPredicted RBP19.48■□□□□ 0.71
SMC4-216ENST00000485645 BTG3Q14201 252 aaPredicted RBP19.48■□□□□ 0.71
SMC4-216ENST00000485645 PDXDC2PQ6P474 469 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 CCDC60Q8IWA6 550 aaPredicted RBP19.48■□□□□ 0.71
SMC4-216ENST00000485645 ATP8B4Q8TF62 1192 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 PHKBQ93100 1093 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 ZNF689Q96CS4 500 aaPredicted RBP19.48■□□□□ 0.71
SMC4-216ENST00000485645 ZNF577Q9BSK1 485 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 RC3H2Q9HBD1 1191 aaKnown RBP19.48■□□□□ 0.71
SMC4-216ENST00000485645 TBC1D22BQ9NU19 505 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 PADI3Q9ULW8 664 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 IGSF9BQ9UPX0 1349 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 KDM3AQ9Y4C1 1321 aa19.48■□□□□ 0.71
SMC4-216ENST00000485645 C5orf67F2Z3F1 127 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 COL9A1P20849 921 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 KRT76Q01546 638 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 PAK2Q13177 524 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 LEXMQ3ZCV2 418 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 SWSAP1Q6NVH7 229 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 BICD2Q8TD16 824 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 LINC01599Q8WXQ3 324 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 CLP1Q92989 425 aaKnown RBP19.47■□□□□ 0.71
SMC4-216ENST00000485645 UIMC1Q96RL1 719 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 C11orf84Q9BUA3 381 aaPredicted RBP19.47■□□□□ 0.71
SMC4-216ENST00000485645 C1QTNF1Q9BXJ1 281 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 RNF26Q9BY78 433 aaPredicted RBP19.47■□□□□ 0.71
SMC4-216ENST00000485645 LOXHD1Q8IVV2 1947 aa19.47■□□□□ 0.71
SMC4-216ENST00000485645 COL1A2P08123 1366 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 ADAMTS3O15072 1205 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 DGKIO75912 1065 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 LINC00271P0C7V0 271 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 NTRK3Q16288 839 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 TCEAL5Q5H9L2 206 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 ZNF484Q5JVG2 852 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 ZNF746Q6NUN9 644 aaPredicted RBP19.46■□□□□ 0.71
SMC4-216ENST00000485645 RTN4RL1Q86UN2 441 aaPredicted RBP19.46■□□□□ 0.71
SMC4-216ENST00000485645 CKAP2LQ8IYA6 745 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 CCDC148Q8NFR7 591 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.46■□□□□ 0.71
SMC4-216ENST00000485645 NSUN3Q9H649 340 aaKnown RBP19.46■□□□□ 0.71
SMC4-216ENST00000485645 TCEAL9Q9UHQ7 104 aa19.46■□□□□ 0.71
SMC4-216ENST00000485645 MYO7AQ13402 2215 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 PPFIA3O75145 1194 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 STAG3L1P0CL83 205 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 IFNAR1P17181 557 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 PDIA3P30101 505 aaKnown RBP19.45■□□□□ 0.7
SMC4-216ENST00000485645 CCT2P78371 535 aaKnown RBP19.45■□□□□ 0.7
SMC4-216ENST00000485645 PRR16Q569H4 304 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 NPAS4Q8IUM7 802 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 SMAP1Q8IYB5 467 aaPredicted RBP19.45■□□□□ 0.7
SMC4-216ENST00000485645 RASGRP4Q8TDF6 673 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 SLC26A6Q9BXS9 759 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 LMAN2LQ9H0V9 348 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 GINS2Q9Y248 185 aa19.45■□□□□ 0.7
SMC4-216ENST00000485645 PSAPP07602 524 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 ATP4AP20648 1035 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 CIITAP33076 1130 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 EVCP57679 992 aa19.44■□□□□ 0.7
SMC4-216ENST00000485645 FAM43BQ6ZT52 329 aaPredicted RBP19.44■□□□□ 0.7
SMC4-216ENST00000485645 CMTR2Q8IYT2 770 aaKnown RBP19.44■□□□□ 0.7
SMC4-216ENST00000485645 KIAA0319LQ8IZA0 1049 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms