RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 TPM3P06753 285 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 TGFB3P10600 412 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
CTSA-208ENST00000485627 ADORA2AP29274 412 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 PRCPP42785 496 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 STX17P56962 302 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 SP4Q02446 784 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 COASYQ13057 564 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 NCAPHQ15003 741 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 HERC4Q5GLZ8 1057 aaPredicted RBP10.59□□□□□ -0.71
CTSA-208ENST00000485627 FAM26FQ5R3K3 315 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 SPATA1Q5VX52 437 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 SARM1Q6SZW1 724 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 PLEKHH3Q7Z736 793 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 DPP9Q86TI2 863 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 TRMT44Q8IYL2 757 aaKnown RBP10.59□□□□□ -0.71
CTSA-208ENST00000485627 ADSSL1Q8N142 457 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 ANKRD20A12PQ8NF67 263 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 ATP6V0A1Q93050 837 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 DHTKD1Q96HY7 919 aaPredicted RBP10.59□□□□□ -0.71
CTSA-208ENST00000485627 ZFYVE28Q9HCC9 887 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 SLC39A2Q9NP94 309 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 KCND2Q9NZV8 630 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 MAPK8IP1Q9UQF2 711 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 COL4A3BPQ9Y5P4 624 aa10.59□□□□□ -0.71
CTSA-208ENST00000485627 ASTN1O14525 1302 aa10.58□□□□□ -0.71
CTSA-208ENST00000485627 BACH1O14867 736 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 FAM13AO94988 1023 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 LYPLA2O95372 231 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 CCNE2O96020 404 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 ZNF75DP51815 510 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 ACTR2P61160 394 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 RAD51AP2Q09MP3 1159 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 COBLL1Q53SF7 1204 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 RINT1Q6NUQ1 792 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
CTSA-208ENST00000485627 CYFIP1Q7L576 1253 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 GPR142Q7Z601 462 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.58□□□□□ -0.72
CTSA-208ENST00000485627 C4orf19Q8IY42 314 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 DNAJC19Q96DA6 116 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 PDLIM2Q96JY6 352 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 MLXIPQ9HAP2 919 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 CPA4Q9UI42 421 aa10.58□□□□□ -0.72
CTSA-208ENST00000485627 HTTP42858 3142 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 NPHP3-ACAD11A0A0J9YXS1 232 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 SLC15A5A6NIM6 579 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTSA-208ENST00000485627 SORBS3O60504 671 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 FGFR1OPO95684 399 aaKnown RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 GAP43P17677 238 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 CCNE1P24864 410 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 YWHABP31946 246 aaKnown RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 UBASH3AP57075 661 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 FANCCQ00597 558 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 SPAG1Q07617 926 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 STK4Q13043 487 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 GIT2Q14161 759 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 PKN2Q16513 984 aaKnown RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 ZNF792Q3KQV3 632 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 ARSHQ5FYA8 562 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 SWSAP1Q6NVH7 229 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 GUF1Q8N442 669 aaKnown RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 NOC3LQ8WTT2 800 aaKnown RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 TRIM47Q96LD4 638 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 TSG101Q99816 390 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 REEP2Q9BRK0 252 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 RUSC1Q9BVN2 902 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 ANKEF1Q9NU02 776 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 MAGEC2Q9UBF1 373 aaPredicted RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 GABBR1Q9UBS5 961 aa10.57□□□□□ -0.72
CTSA-208ENST00000485627 DBR1Q9UK59 544 aaKnown RBP10.57□□□□□ -0.72
CTSA-208ENST00000485627 FRMD3A2A2Y4 597 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 NOP56O00567 594 aaKnown RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 AP5Z1O43299 807 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 TLR2O60603 784 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 GGPS1O95749 300 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 SUPT20HL2P0C7V6 817 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 EN2P19622 333 aaPredicted RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 UBA1P22314 1058 aaKnown RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 SP2Q02086 613 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 GRB14Q14449 540 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 LY6KQ17RY6 165 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 FILIP1LQ4L180 1135 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 XKR9Q5GH70 373 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 FAM160B1Q5W0V3 765 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 ABHD15Q6UXT9 468 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 STXBP4Q6ZWJ1 553 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 C1orf186Q6ZWK4 172 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 ARMCX2Q7L311 632 aa10.56□□□□□ -0.72
CTSA-208ENST00000485627 TRMT1LQ7Z2T5 733 aaKnown RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 ZNF467Q7Z7K2 595 aaPredicted RBP10.56□□□□□ -0.72
CTSA-208ENST00000485627 CREBRFQ8IUR6 639 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms