RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-213	ENST00000485530	FXR2	P51116	673 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	STAT5B	P51692	787 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	NUCB2	P80303	420 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	FPGS	Q05932	587 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	ITGA7	Q13683	1181 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	PDIA5	Q14554	519 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	EPHA7	Q15375	998 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	NCAPH2	Q6IBW4	605 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	MIS18BP1	Q6P0N0	1132 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	MIER3	Q7Z3K6	550 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	IGSF22	Q8N9C0	903 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	TIFA	Q96CG3	184 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	ASB2	Q96Q27	587 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	MMTAG2	Q9BU76	263 aa	Known RBP	13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	GABBR1	Q9UBS5	961 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	FBXO2	Q9UK22	296 aa	Predicted RBP	13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	RCOR1	Q9UKL0	485 aa		13.76	□□□□□ -0.21
TRA2B-213	ENST00000485530	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	WDR64	B1ANS9	1081 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	LAD1	O00515	517 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	PSAP	P07602	524 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	RAG1	P15918	1043 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	MARK3	P27448	753 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	SFN	P31947	248 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	CHMP4BP1	P59074	171 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	ZNF200	P98182	395 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	MFSD10	Q14728	455 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	PLCB4	Q15147	1175 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	ECM1	Q16610	540 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	KIAA0753	Q2KHM9	967 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	BRDT	Q58F21	947 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	DTHD1	Q6ZMT9	781 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	USP49	Q70CQ1	688 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	PLPPR4	Q7Z2D5	763 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	BANK1	Q8NDB2	785 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	AFAP1L1	Q8TED9	768 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	PPM1E	Q8WY54	764 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	VTI1A	Q96AJ9	217 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	DYDC2	Q96IM9	177 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	GLT1D1	Q96MS3	346 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	ZNF396	Q96N95	335 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	CLIC6	Q96NY7	704 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	CTAGE1	Q96RT6	745 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	UHRF1	Q96T88	793 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	SMARCAD1	Q9H4L7	1026 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	SAMM50	Q9Y512	469 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	NCOR1	O75376	2440 aa		13.75	□□□□□ -0.21
TRA2B-213	ENST00000485530	XIRP2	A4UGR9	3374 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	EMSY	Q7Z589	1322 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	TMEM150B	A6NC51	233 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	VWA3A	A6NCI4	1184 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	ZBTB42	B2RXF5	422 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	BACH1	O14867	736 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	PQBP1	O60828	265 aa	Known RBP	13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	MED24	O75448	989 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	CABYR	O75952	493 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	JAK3	P52333	1124 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	CTTN	Q14247	550 aa	Known RBP	13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	SPECC1	Q5M775	1068 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	CATSPER3	Q86XQ3	398 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	ZNF579	Q8NAF0	562 aa	Known RBP	13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	RDM1	Q8NG50	284 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	GLG1	Q92896	1179 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	ZBTB10	Q96DT7	871 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	GAS2L1	Q99501	681 aa	Predicted RBP	13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	STARD7	Q9NQZ5	370 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	ZNF302	Q9NR11	478 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	CHMP5	Q9NZZ3	219 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	HDAC6	Q9UBN7	1215 aa		13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	SRPRB	Q9Y5M8	271 aa	Known RBP	13.74	□□□□□ -0.21
TRA2B-213	ENST00000485530	ARVCF	O00192	962 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	HOXC8	P31273	242 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	ADAM17	P78536	824 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	CYP4A11	Q02928	519 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	MARCH8	Q5T0T0	291 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	ATL3	Q6DD88	541 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	PDXDC2P	Q6P474	469 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	CSRNP2	Q9H175	543 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	TRPV6	Q9H1D0	765 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	SETD4	Q9NVD3	440 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	ERAP1	Q9NZ08	941 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	LRWD1	Q9UFC0	647 aa		13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.73	□□□□□ -0.21
TRA2B-213	ENST00000485530	IGSF9B	Q9UPX0	1349 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530		A0A0U1RQG5	324 aa	Predicted RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	SPTLC2	O15270	562 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	YEATS4	O95619	227 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	BMP15	O95972	392 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	P4HB	P07237	508 aa	Known RBP	13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	SMIM10L2A	P0DMW4	78 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	SMIM10L2B	P0DMW5	78 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	INSRR	P14616	1297 aa		13.72	□□□□□ -0.21
TRA2B-213	ENST00000485530	PBX2	P40425	430 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms