RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 LOXHD1Q8IVV2 1947 aa14.9□□□□□ -0.02
HDAC6-227ENST00000485102 WDFY4Q6ZS81 3184 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 IGKV6D-21A0A0A0MT36 114 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 M0QZ92 97 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 FOSP01100 380 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-227ENST00000485102 ITGB1P05556 798 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 STAT5BP51692 787 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 COASYQ13057 564 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 PLCB4Q15147 1175 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 NFXL1Q6ZNB6 911 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 TMTC3Q6ZXV5 915 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 EFHBQ8N7U6 833 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 UIMC1Q96RL1 719 aa14.89□□□□□ -0.03
HDAC6-227ENST00000485102 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-227ENST00000485102 CACNA1HO95180 2353 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 MEIS1O00470 390 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 SCG2P13521 617 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 DNAJB1P25685 340 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 GTF2F1P35269 517 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC6-227ENST00000485102 ACTR2P61160 394 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 IGBP1P78318 339 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 NHLH1Q02575 133 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 UBE3AQ05086 875 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 NECTIN1Q15223 517 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 UBE2SQ16763 222 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 CEP55Q53EZ4 464 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 HFE2Q6ZVN8 426 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 ALYREFQ86V81 257 aaKnown RBP14.88□□□□□ -0.03
HDAC6-227ENST00000485102 RNF135Q8IUD6 432 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 CMTR1Q8N1G2 835 aaKnown RBP14.88□□□□□ -0.03
HDAC6-227ENST00000485102 KLHL23Q8NBE8 558 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 SMRP1Q8NCR6 262 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 MFSD14AQ96MC6 490 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 FBXL18Q96ME1 805 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 SDF4Q9BRK5 362 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 LSG1Q9H089 658 aaKnown RBP14.88□□□□□ -0.03
HDAC6-227ENST00000485102 FAM49AQ9H0Q0 323 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-227ENST00000485102 RIC8AQ9NPQ8 531 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 SLC12A7Q9Y666 1083 aa14.88□□□□□ -0.03
HDAC6-227ENST00000485102 STXBP3O00186 592 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 LINC01565O15544 149 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 PAK2Q13177 524 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 COL9A3Q14050 684 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-227ENST00000485102 CBX2Q14781 532 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-227ENST00000485102 PPP1R18Q6NYC8 613 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 MTHFD1LQ6UB35 978 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 POF1BQ8WVV4 589 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 EDAQ92838 391 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 TMX1Q9H3N1 280 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 IGFLR1Q9H665 355 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 CLEC1BQ9P126 229 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 TRPC6Q9Y210 931 aa14.87□□□□□ -0.03
HDAC6-227ENST00000485102 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 LOC730098B7Z3J9 87 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 hCG_1984214I3L0E3 225 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 SLC27A2O14975 620 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 HBP1O60381 514 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 RXRAP19793 462 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 SARSP49591 514 aaKnown RBP14.86□□□□□ -0.03
HDAC6-227ENST00000485102 NDUFV1P49821 464 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 KRT76Q01546 638 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 PKN1Q16512 942 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 ODR4Q5SWX8 454 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 NIPA1Q7RTP0 329 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 ZNF713Q8N859 430 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-227ENST00000485102 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 GLT8D2Q9H1C3 349 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 AGO4Q9HCK5 861 aaKnown RBP14.86□□□□□ -0.03
HDAC6-227ENST00000485102 PKD2L1Q9P0L9 805 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 MUTYHQ9UIF7 546 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 KIAA1671Q9BY89 1806 aa14.86□□□□□ -0.03
HDAC6-227ENST00000485102 COL1A2P08123 1366 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 EVPLQ92817 2033 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 hCG_1642624A0A1W2PR95 340 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 ARP10275 920 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 SREBF1P36956 1147 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 MRE11P49959 708 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 FUT2Q10981 343 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 ITGB3BPQ13352 177 aaPredicted RBP14.85□□□□□ -0.03
HDAC6-227ENST00000485102 AP3B2Q13367 1082 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 CLUL1Q15846 466 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 CREB3L3Q68CJ9 461 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 WWC2Q6AWC2 1192 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 PDE12Q6L8Q7 609 aaKnown RBP14.85□□□□□ -0.03
HDAC6-227ENST00000485102 TYW1BQ6NUM6 668 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 ABHD15Q6UXT9 468 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 HEATR3Q7Z4Q2 680 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 ADGRD2Q7Z7M1 963 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 CCDC82Q8N4S0 544 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 TRAPPC12Q8WVT3 735 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 ERVK-5Q9HDB9 667 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 RGS18Q9NS28 235 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 C1orf112Q9NSG2 853 aa14.85□□□□□ -0.03
HDAC6-227ENST00000485102 RBM28Q9NW13 759 aaKnown RBP14.85□□□□□ -0.03
HDAC6-227ENST00000485102 FNDC1Q4ZHG4 1894 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-227ENST00000485102 C9IYK1 514 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 GLP2RO95838 553 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 KLRC1P26715 233 aa14.84□□□□□ -0.03
HDAC6-227ENST00000485102 CLK2P49760 499 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms